RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 FMR1Q06787 632 aaKnown RBP eCLIP20.9■□□□□ 0.94
COL15A1-201ENST00000375001 PTGISQ16647 500 aa20.9■□□□□ 0.94
COL15A1-201ENST00000375001 CCDC142Q17RM4 750 aa20.9■□□□□ 0.94
COL15A1-201ENST00000375001 RRM2BQ7LG56 351 aa20.9■□□□□ 0.94
COL15A1-201ENST00000375001 TMEM245Q9H330 911 aa20.9■□□□□ 0.94
COL15A1-201ENST00000375001 ASAP2O43150 1006 aa20.89■□□□□ 0.94
COL15A1-201ENST00000375001 GUCY1A2P33402 732 aa20.89■□□□□ 0.94
COL15A1-201ENST00000375001 RAB14P61106 215 aa20.89■□□□□ 0.94
COL15A1-201ENST00000375001 EXOSC10Q01780 885 aaKnown RBP20.89■□□□□ 0.94
COL15A1-201ENST00000375001 HIF1AQ16665 826 aa20.89■□□□□ 0.94
COL15A1-201ENST00000375001 TXNRD1Q16881 649 aa20.89■□□□□ 0.94
COL15A1-201ENST00000375001 NAALADL2Q58DX5 795 aa20.89■□□□□ 0.94
COL15A1-201ENST00000375001 ARMCX2Q7L311 632 aa20.89■□□□□ 0.94
COL15A1-201ENST00000375001 ZIM3Q96PE6 472 aa20.89■□□□□ 0.94
COL15A1-201ENST00000375001 KCNQ4P56696 695 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 SFR1Q86XK3 245 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 CASP10Q92851 521 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 BBS2Q9BXC9 721 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 LRRC7Q96NW7 1537 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 ZCCHC18P0CG32 403 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 HOXA13P31271 388 aaPredicted RBP20.89■□□□□ 0.93
COL15A1-201ENST00000375001 CPA2P48052 419 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 MIS18BP1Q6P0N0 1132 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 CDH16O75309 829 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 SNAP25P60880 206 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 HEATR6Q6AI08 1181 aaKnown RBP20.89■□□□□ 0.93
COL15A1-201ENST00000375001 HORMAD1Q86X24 394 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 CHP1Q99653 195 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 MRPL1Q9BYD6 325 aaKnown RBP20.89■□□□□ 0.93
COL15A1-201ENST00000375001 KANSL2Q9H9L4 492 aa20.89■□□□□ 0.93
COL15A1-201ENST00000375001 PNMA6FA0A0J9YX94 578 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 EFCAB14O75071 495 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 ROR1Q01973 937 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 STX3Q13277 289 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 ALCAMQ13740 583 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 AGBL2Q5U5Z8 902 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 TMC4Q7Z404 712 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 PIGOQ8TEQ8 1089 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 COQ7Q99807 217 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 EPAS1Q99814 870 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 SIKE1Q9BRV8 207 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 BFARQ9NZS9 450 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.88■□□□□ 0.93
COL15A1-201ENST00000375001 OCM2P0CE71 109 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 OCMP0CE72 109 aaPredicted RBP20.88■□□□□ 0.93
COL15A1-201ENST00000375001 PLOD1Q02809 727 aaPredicted RBP20.88■□□□□ 0.93
COL15A1-201ENST00000375001 RNPEPQ9H4A4 650 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 DIABLOQ9NR28 239 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 LMTK3Q96Q04 1460 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 FAM95CA0A1B0GW59 222 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 GGPS1O95749 300 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 CALB1P05937 261 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 POTEAQ6S8J7 498 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 TLK2Q86UE8 772 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 RFFLQ8WZ73 363 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 IL25Q9H293 177 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 SHROOM2Q13796 1616 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 RFX7Q2KHR2 1363 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 FAM47DPA6NHR8 397 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 RHOT1Q8IXI2 618 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 MXD3Q9BW11 206 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 TSR3Q9UJK0 312 aaKnown RBP20.88■□□□□ 0.93
COL15A1-201ENST00000375001 ERVV-1B6SEH8 477 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 OR6B3Q8NGW1 331 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 EGFL8Q99944 293 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 SLC9A2Q9UBY0 812 aa20.88■□□□□ 0.93
COL15A1-201ENST00000375001 TMEM120BA0PK00 339 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 TMCC1O94876 653 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 BMP3P12645 472 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 ARPP19P56211 112 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 PTK2BQ14289 1009 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 MXD4Q14582 209 aaPredicted RBP20.87■□□□□ 0.93
COL15A1-201ENST00000375001 PIGBQ92521 554 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 C9orf72Q96LT7 481 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 PPP1R16BQ96T49 567 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 LAMC1P11047 1609 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 SNUPNO95149 360 aaKnown RBP20.87■□□□□ 0.93
COL15A1-201ENST00000375001 TBL3Q12788 808 aaKnown RBP20.87■□□□□ 0.93
COL15A1-201ENST00000375001 ZNF667Q5HYK9 610 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.87■□□□□ 0.93
COL15A1-201ENST00000375001 RPF1Q9H9Y2 349 aaKnown RBP20.87■□□□□ 0.93
COL15A1-201ENST00000375001 MAP3K4Q9Y6R4 1608 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 NIM1KQ8IY84 436 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 K7ERI5 159 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 CDH2P19022 906 aaPredicted RBP20.87■□□□□ 0.93
COL15A1-201ENST00000375001 BCAR1P56945 870 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 SCARF1Q14162 830 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 RBBP7Q16576 425 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 C16orf89Q6UX73 402 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 SEL1LQ9UBV2 794 aa20.87■□□□□ 0.93
COL15A1-201ENST00000375001 ABCD1P33897 745 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 SURF1Q15526 300 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 SMARCAL1Q9NZC9 954 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 MYO1GB0I1T2 1018 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 TTC33Q6PID6 262 aaPredicted RBP20.86■□□□□ 0.93
COL15A1-201ENST00000375001 PPHLN1Q8NEY8 458 aaKnown RBP20.86■□□□□ 0.93
COL15A1-201ENST00000375001 PHF21AQ96BD5 680 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 OMA1Q96E52 524 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 CYP27B1O15528 508 aa20.86■□□□□ 0.93
COL15A1-201ENST00000375001 LUZP2Q86TE4 346 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms