RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SYCE1LA8MT33 242 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 KRT38O76015 456 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 TMCC1O94876 653 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 PAPOLAP51003 745 aaKnown RBP6.68□□□□□ -1.34
PTPN3-202ENST00000374541 PREPLQ4J6C6 727 aaPredicted RBP6.68□□□□□ -1.34
PTPN3-202ENST00000374541 ACAD11Q709F0 780 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 ARMCX2Q7L311 632 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 PCGF5Q86SE9 256 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 FBXO16Q8IX29 292 aaPredicted RBP6.68□□□□□ -1.34
PTPN3-202ENST00000374541 NDUFAF2Q8N183 169 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 PPM1KQ8N3J5 372 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 TIFAQ96CG3 184 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 ZMYND12Q9H0C1 365 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 TMEM260Q9NX78 707 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 EHD2Q9NZN4 543 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 STRCP1A6NGW2 1772 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 FRMD3A2A2Y4 597 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 DLL1O00548 723 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 KRT1P04264 644 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 SCG2P13521 617 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 PAMP19021 973 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 GRIN1Q05586 938 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 STARD3Q14849 445 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 UBE3CQ15386 1083 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 KLHL38Q2WGJ6 581 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 PPP4R3CPQ6ZMV5 832 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 CEP70Q8NHQ1 597 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 GRAMD1AQ96CP6 724 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 TUBGCP2Q9BSJ2 902 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 ING2Q9H160 280 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 THAP9Q9H5L6 903 aa6.68□□□□□ -1.34
PTPN3-202ENST00000374541 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 ANO9A1A5B4 782 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 PRR23AA6NEV1 266 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 HNRNPRO43390 633 aaKnown RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 MYL4P12829 197 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 PIK3CAP42336 1068 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 STAT5BP51692 787 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 BEX3Q00994 111 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 PRAMEF19Q5SWL8 479 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 KCTD16Q68DU8 428 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 CXCL17Q6UXB2 119 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 LCORLQ8N3X6 602 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TTC13Q8NBP0 860 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 BEST2Q8NFU1 509 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 ZNF653Q96CK0 615 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 PGBD1Q96JS3 809 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 ERAP1Q9NZ08 941 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TNKSO95271 1327 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TTLL13PA6NNM8 815 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 H7C1W4 665 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 HUS1O60921 280 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 ALDH1A2O94788 518 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 AP2B1P63010 937 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TFAMQ00059 246 aaKnown RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 MGAT5BQ3V5L5 792 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 PATL1Q86TB9 770 aaKnown RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 NUDCD3Q8IVD9 361 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 FAM122AQ96E09 287 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 FMO2Q99518 471 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 FOXP1Q9H334 677 aaPredicted RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 LRRC4Q9HBW1 653 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 BATF3Q9NR55 127 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 FANCLQ9NW38 375 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 WARS2Q9UGM6 360 aaKnown RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 APOBEC2Q9Y235 224 aaKnown RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 NR2E1Q9Y466 385 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 CCDC78A2IDD5 438 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 H7C4K7 107 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 ZW10O43264 779 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 DAB1O75553 588 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TOM1L1O75674 476 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 PRELPP51888 382 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 PLTPP55058 493 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 MAPK6Q16659 721 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 SWSAP1Q6NVH7 229 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 SPDYE1Q8NFV5 336 aaPredicted RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 FBXO18Q8NFZ0 1043 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 SKA2Q8WVK7 121 aaPredicted RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 SCFD1Q8WVM8 642 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 P2RX5Q93086 422 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 NAF1Q96HR8 494 aaKnown RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TSEN34Q9BSV6 310 aaKnown RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 NEUROG2Q9H2A3 272 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 SMYD2Q9NRG4 433 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 STRIP2Q9ULQ0 834 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 ATP8A1Q9Y2Q0 1164 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 KIF1AQ12756 1690 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 FAM47DPA6NHR8 397 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 ALDH2P05091 517 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 SLFN14P0C7P3 912 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 CASP14P31944 242 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 KRT76Q01546 638 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 DR1Q01658 176 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TTC19Q6DKK2 380 aaPredicted RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TMED8Q6PL24 325 aaPredicted RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TRIM67Q6ZTA4 783 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms