RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 C17orf99Q6UX52 265 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 TRAPPC11Q7Z392 1133 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 DNAAF5Q86Y56 855 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 GLYCTKQ8IVS8 523 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 OLIG1Q8TAK6 271 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 ZNF516Q92618 1163 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 ELMO3Q96BJ8 720 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 KREMEN1Q96MU8 473 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 ACO2Q99798 780 aaKnown RBP18.25■□□□□ 0.51
PTPN20-203ENST00000374342 TUT1Q9H6E5 874 aaKnown RBP18.25■□□□□ 0.51
PTPN20-203ENST00000374342 PUF60Q9UHX1 559 aaKnown RBP18.25■□□□□ 0.51
PTPN20-203ENST00000374342 EFCAB8A8MWE9 144 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 PIK3CAP42336 1068 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 MFAP3P55082 362 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 PPFIA1Q13136 1202 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 BIRC3Q13489 604 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 DGKDQ16760 1214 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 WHAMMP3Q1A5X7 153 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 CGRRF1Q99675 332 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 SEPT11Q9NVA2 429 aaKnown RBP18.25■□□□□ 0.51
PTPN20-203ENST00000374342 AKT3Q9Y243 479 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 TLL2Q9Y6L7 1015 aa18.25■□□□□ 0.51
PTPN20-203ENST00000374342 HOXD8P13378 290 aaPredicted RBP18.24■□□□□ 0.51
PTPN20-203ENST00000374342 CLDN10P78369 228 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 CCL14Q16627 93 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 TEX35Q5T0J7 233 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 TDRD10Q5VZ19 366 aaKnown RBP18.24■□□□□ 0.51
PTPN20-203ENST00000374342 PAPD7Q5XG87 772 aaKnown RBP18.24■□□□□ 0.51
PTPN20-203ENST00000374342 C15orf39Q6ZRI6 1047 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 SRGAP1Q7Z6B7 1085 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 UBXN4Q92575 508 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 LENG1Q96BZ8 264 aaPredicted RBP18.24■□□□□ 0.51
PTPN20-203ENST00000374342 SYT11Q9BT88 431 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 PI4K2AQ9BTU6 479 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 ZFYVE28Q9HCC9 887 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 C1orf112Q9NSG2 853 aa18.24■□□□□ 0.51
PTPN20-203ENST00000374342 ABT1Q9ULW3 272 aaKnown RBP18.24■□□□□ 0.51
PTPN20-203ENST00000374342 FAM155AB1AL88 458 aaPredicted RBP18.23■□□□□ 0.51
PTPN20-203ENST00000374342 MAGEB2O15479 319 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 ASAP2O43150 1006 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 B4GALT5O43286 388 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 CYP2B6P20813 491 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 TNFSF9P41273 254 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 PHKA2P46019 1235 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 PTENP60484 403 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 MBTD1Q05BQ5 628 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 SREBF2Q12772 1141 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 CRHR2Q13324 411 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 PRPF4BQ13523 1007 aaKnown RBP18.23■□□□□ 0.51
PTPN20-203ENST00000374342 GRIK4Q16099 956 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 RNF10Q8N5U6 811 aaKnown RBP18.23■□□□□ 0.51
PTPN20-203ENST00000374342 LINC01465Q8N7H1 131 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 CEP112Q8N8E3 955 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 HELQQ8TDG4 1101 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 SLC20A1Q8WUM9 679 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 JRKLQ9Y4A0 524 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 SAR1BQ9Y6B6 198 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 ATP8B3O60423 1300 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 HLA-DRAP01903 254 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 VTNP04004 478 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 HOXC6P09630 235 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 CYP2C19P33261 490 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 RGS2P41220 211 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 INHBEP58166 350 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 CHMP4BP1P59074 171 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 GRM1Q13255 1194 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 ZNF568Q3ZCX4 644 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 ZACNQ401N2 412 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 ATF7IP2Q5U623 682 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 MTHFD1LQ6UB35 978 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 BRSK2Q8IWQ3 736 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 SLC30A5Q8TAD4 765 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 SHC3Q92529 594 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 GOLGA1Q92805 767 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 MINDY3Q9H8M7 445 aa18.23■□□□□ 0.51
PTPN20-203ENST00000374342 CNTNAP2Q9UHC6 1331 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 TMCO5BA8MYB1 307 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 ACKR2O00590 384 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 ABLIM1O14639 778 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 TNPO2O14787 897 aaKnown RBP18.22■□□□□ 0.51
PTPN20-203ENST00000374342 OGTO15294 1046 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 DYNC1LI2O43237 492 aaPredicted RBP18.22■□□□□ 0.51
PTPN20-203ENST00000374342 FAM189A1O60320 539 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 SRGAP2O75044 1071 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 CLSTN1O94985 981 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 H2AFZP0C0S5 128 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 TNFAIP3P21580 790 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 MCL1Q07820 350 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 OLFML2BQ68BL8 750 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 MPZL3Q6UWV2 235 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 H2AFVQ71UI9 128 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 USP6NLQ92738 828 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 TATDN2Q93075 761 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 APBA2Q99767 749 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 AGPAT1Q99943 283 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 FZD8Q9H461 694 aa18.22■□□□□ 0.51
PTPN20-203ENST00000374342 FAM170AA1A519 330 aa18.21■□□□□ 0.51
PTPN20-203ENST00000374342 ZC3H11AO75152 810 aaKnown RBP eCLIP18.21■□□□□ 0.51
PTPN20-203ENST00000374342 C4BPAP04003 597 aaKnown RBP18.21■□□□□ 0.51
PTPN20-203ENST00000374342 ZNF865P0CJ78 1059 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms