RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 ZNF131P52739 623 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 EMC2Q15006 297 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 XKR3Q5GH77 459 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 ERO1BQ86YB8 467 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 SEPT1Q8WYJ6 367 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 TBC1D31Q96DN5 1066 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 ZBTB10Q96DT7 871 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 MRIQ9BWK5 157 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 ASCC2Q9H1I8 757 aaPredicted RBP8.34□□□□□ -1.08
HERC4-202ENST00000373700 AGO4Q9HCK5 861 aaKnown RBP8.34□□□□□ -1.08
HERC4-202ENST00000373700 SLC5A4Q9NY91 659 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 RGS17Q9UGC6 210 aaPredicted RBP8.34□□□□□ -1.08
HERC4-202ENST00000373700 TOGARAM1Q9Y4F4 1720 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 GRID2IPA4D2P6 1211 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 FAM153BP0C7A2 387 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 DSG3P32926 999 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 BASP1P80723 227 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 SNAPC2Q13487 334 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 E2F5Q15329 346 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 ZRSR2Q15696 482 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 FAM153CQ494X1 144 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 TMEM119Q4V9L6 283 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 FIGNQ5HY92 759 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 FASTKD5Q7L8L6 764 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 TPCN2Q8NHX9 752 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 HNRNPLLQ8WVV9 542 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 CASKIN2Q8WXE0 1202 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 POLR3CQ9BUI4 534 aaPredicted RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 FAM153AQ9UHL3 310 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 LTBP4Q8N2S1 1624 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 NHSL1Q5SYE7 1610 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 H0YCG3 227 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 M0QZ92 97 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 ZNF263O14978 683 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 SGPL1O95470 568 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 NPTX2P47972 431 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 IRAK1P51617 712 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 TFDP1Q14186 410 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 KRT81Q14533 505 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 BBS9Q3SYG4 887 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 FAM47EQ6ZV65 393 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 ZNF720Q7Z2F6 126 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 KAT5Q92993 513 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 SLC35C1Q96A29 364 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 FAM149B1Q96BN6 582 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 ACSF2Q96CM8 615 aaPredicted RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 RANBP17Q9H2T7 1088 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 SPC25Q9HBM1 224 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 KCNMB3Q9NPA1 279 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 SUCLA2Q9P2R7 463 aaPredicted RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 MAD1L1Q9Y6D9 718 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 ROBO3Q96MS0 1386 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 HMGB1P1B2RPK0 211 aaPredicted RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 F5H423 210 aaPredicted RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 DGAT1O75907 488 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 SPATA31C1P0DKV0 1188 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 YWHAGP61981 247 aaKnown RBP eCLIP8.33□□□□□ -1.08
HERC4-202ENST00000373700 FKBP1AP62942 108 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 MEA1Q16626 185 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 UGCGQ16739 394 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 Q4G0T1 1027 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 NUGGCQ68CJ6 796 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 FOXR1Q6PIV2 292 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 APTXQ7Z2E3 356 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 RFX6Q8HWS3 928 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 CREG2Q8IUH2 290 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 SRRM1Q8IYB3 904 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 MAIP1Q8WWC4 291 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 RNF34Q969K3 372 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 ZBTB45Q96K62 511 aaPredicted RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 ATP6V1G3Q96LB4 118 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 NGRNQ9NPE2 291 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 ODF2LQ9ULJ1 636 aa8.33□□□□□ -1.08
HERC4-202ENST00000373700 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.33□□□□□ -1.08
HERC4-202ENST00000373700 SPEF2Q9C093 1822 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 IGKV6D-41A0A0C4DH26 115 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 TLR3O15455 904 aaKnown RBP8.32□□□□□ -1.08
HERC4-202ENST00000373700 GJB1P08034 283 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
HERC4-202ENST00000373700 GNA15P30679 374 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 PMS2P54278 862 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 SLC12A3P55017 1021 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 CLUL1Q15846 466 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 ARSHQ5FYA8 562 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 ERICH1Q86X53 443 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 MMGT1Q8N4V1 131 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 ETNPPLQ8TBG4 499 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 GRK7Q8WTQ7 553 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 HSPH1Q92598 858 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 FERMT1Q9BQL6 677 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 RPF1Q9H9Y2 349 aaKnown RBP8.32□□□□□ -1.08
HERC4-202ENST00000373700 DBR1Q9UK59 544 aaKnown RBP8.32□□□□□ -1.08
HERC4-202ENST00000373700 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 GLI3P10071 1580 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 TNPO2O14787 897 aaKnown RBP8.32□□□□□ -1.08
HERC4-202ENST00000373700 SLC16A3O15427 465 aaKnown RBP8.32□□□□□ -1.08
HERC4-202ENST00000373700 MMEP08473 750 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 WEE2P0C1S8 567 aa8.32□□□□□ -1.08
HERC4-202ENST00000373700 ZNF286BP0CG31 522 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms