RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 TRIM59Q8IWR1 403 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 THNSL1Q8IYQ7 743 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 TMEM199Q8N511 208 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 RDH13Q8NBN7 331 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 DBF4BQ8NFT6 615 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 ADAM2Q99965 735 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 FAM105AQ9NUU6 356 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 A0A0U1RQF3 1178 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 MGEA5O60502 916 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 ADRB2P07550 413 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 PFKMP08237 780 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 STAG3L1P0CL83 205 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 PPP2R3AQ06190 1150 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 BFSP1Q12934 665 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 USP37Q86T82 979 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 BRSK2Q8IWQ3 736 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 CEP120Q8N960 986 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 CCDC94Q9BW85 323 aaPredicted RBP17.23■□□□□ 0.35
TMEM53-204ENST00000372243 TSPYL2Q9H2G4 693 aaPredicted RBP17.23■□□□□ 0.35
TMEM53-204ENST00000372243 GRPEL1Q9HAV7 217 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 C1orf112Q9NSG2 853 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 KRT13P13646 458 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
TMEM53-204ENST00000372243 TNFSF9P41273 254 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 MTIF2P46199 727 aaKnown RBP17.23■□□□□ 0.35
TMEM53-204ENST00000372243 CYP24A1Q07973 514 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 KRT31Q15323 416 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 SURF1Q15526 300 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 ZBTB41Q5SVQ8 909 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 CNKSR3Q6P9H4 555 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 SARM1Q6SZW1 724 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 APTXQ7Z2E3 356 aaKnown RBP17.23■□□□□ 0.35
TMEM53-204ENST00000372243 MRPL10Q7Z7H8 261 aaKnown RBP17.23■□□□□ 0.35
TMEM53-204ENST00000372243 HACE1Q8IYU2 909 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 SMG8Q8ND04 991 aaKnown RBP17.23■□□□□ 0.35
TMEM53-204ENST00000372243 TMC2Q8TDI7 906 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 ACAP3Q96P50 834 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 TUBGCP2Q9BSJ2 902 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 RBAKQ9NYW8 714 aaPredicted RBP17.23■□□□□ 0.35
TMEM53-204ENST00000372243 IPPQ9Y573 584 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 PCDHB2Q9Y5E7 798 aa17.23■□□□□ 0.35
TMEM53-204ENST00000372243 EVI5O60447 810 aa17.22■□□□□ 0.35
TMEM53-204ENST00000372243 PSMD6Q15008 389 aa17.22■□□□□ 0.35
TMEM53-204ENST00000372243 MAN2A1Q16706 1144 aa17.22■□□□□ 0.35
TMEM53-204ENST00000372243 SEZ6Q53EL9 994 aa17.22■□□□□ 0.35
TMEM53-204ENST00000372243 SLC24A5Q71RS6 500 aa17.22■□□□□ 0.35
TMEM53-204ENST00000372243 RTN4RL1Q86UN2 441 aaPredicted RBP17.22■□□□□ 0.35
TMEM53-204ENST00000372243 CD302Q8IX05 232 aa17.22■□□□□ 0.35
TMEM53-204ENST00000372243 C7orf61Q8IZ16 206 aa17.22■□□□□ 0.35
TMEM53-204ENST00000372243 RPUSD2Q8IZ73 545 aaKnown RBP17.22■□□□□ 0.35
TMEM53-204ENST00000372243 PARD3BQ8TEW8 1205 aa17.22■□□□□ 0.35
TMEM53-204ENST00000372243 VWCEQ96DN2 955 aa17.22■□□□□ 0.35
TMEM53-204ENST00000372243 NXF3Q9H4D5 531 aaKnown RBP17.22■□□□□ 0.35
TMEM53-204ENST00000372243 RPF1Q9H9Y2 349 aaKnown RBP17.22■□□□□ 0.35
TMEM53-204ENST00000372243 C9IYK1 514 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 IL18RAPO95256 599 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 TPM2P07951 284 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 MRE11P49959 708 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 VAMP7P51809 220 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 OSTNP61366 133 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 CLDN10P78369 228 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 FAM189BP81408 668 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 FANCCQ00597 558 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 ENOX2Q16206 610 aaKnown RBP17.21■□□□□ 0.35
TMEM53-204ENST00000372243 DEFB128Q7Z7B8 93 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 CREBRFQ8IUR6 639 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 TMEM192Q8IY95 271 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 LINC01599Q8WXQ3 324 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 SLC35C1Q96A29 364 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 ASB7Q9H672 318 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 PLEKHA5Q9HAU0 1116 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 TOPORSQ9NS56 1045 aaPredicted RBP17.21■□□□□ 0.35
TMEM53-204ENST00000372243 SNTG2Q9NY99 539 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.21■□□□□ 0.35
TMEM53-204ENST00000372243 TET1Q8NFU7 2136 aa17.21■□□□□ 0.35
TMEM53-204ENST00000372243 TTC26A0AVF1 554 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 ENPP3O14638 875 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 EOMESO95936 686 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 SERPINC1P01008 464 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 CSF2RAP15509 400 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 COPB1P53618 953 aaKnown RBP17.2■□□□□ 0.34
TMEM53-204ENST00000372243 YARSP54577 528 aaKnown RBP17.2■□□□□ 0.34
TMEM53-204ENST00000372243 RALGAPA2Q2PPJ7 1873 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 SLC10A6Q3KNW5 377 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 MIIPQ5JXC2 388 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 PGBD4Q96DM1 585 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 TSPAN18Q96SJ8 248 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 ELAC1Q9H777 363 aaKnown RBP17.2■□□□□ 0.34
TMEM53-204ENST00000372243 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-204ENST00000372243 LTBP2Q14767 1821 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 CITO14578 2027 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 ANK1P16157 1881 aa17.2■□□□□ 0.34
TMEM53-204ENST00000372243 A0A1B0GTH6 734 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 STX10O60499 249 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 CXCL8P10145 99 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 ITGA4P13612 1032 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 IKBKEQ14164 716 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 ALKAL1Q6UXT8 129 aa17.19■□□□□ 0.34
TMEM53-204ENST00000372243 ZNF598Q86UK7 904 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms