RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 IGDCC4Q8TDY8 1250 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 RABGGTAQ92696 567 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 PDE11AQ9HCR9 933 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 ABHD10Q9NUJ1 306 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 GOLGA8QA0A0J9YX86 632 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 GOLGA8OA6NCC3 632 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 GOLGA8NF8WBI6 632 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 SEC31AO94979 1220 aaKnown RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 HDLBPQ00341 1268 aaKnown RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 EMC2Q15006 297 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 KLC3Q6P597 504 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 EXOC1LA0A1B0GW35 172 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 STXBP3O00186 592 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 NDUFB5O43674 189 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 ZNF746Q6NUN9 644 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 C1orf131Q8NDD1 294 aaKnown RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 ZSCAN32Q9NX65 697 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 KIF17Q9P2E2 1029 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 POLLQ9UGP5 575 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 IP6K2Q9UHH9 426 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 CAPN11Q9UMQ6 739 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 ZC3H4Q9UPT8 1303 aaKnown RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 FER1L4A9Z1Z3 1794 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 UBE3AQ05086 875 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 EFHC2Q5JST6 749 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 APPL2Q8NEU8 664 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 MTFR1LQ9H019 292 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 FAF1Q9UNN5 650 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 TBC1D12O60347 775 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 RPS6KA5O75582 802 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 PPP3CCP48454 512 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 CPT1AP50416 773 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 ATG4CQ96DT6 458 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 CYTH2Q99418 400 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 MTIF3Q9H2K0 278 aaKnown RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 ADARB2Q9NS39 739 aaKnown RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 GPR75-ASB3A0A0A6YYF3 556 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 GTPBP10A4D1E9 387 aaKnown RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 FAM47DPA6NHR8 397 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 MYBL1P10243 752 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 TGFB2P61812 414 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 PDIA5Q14554 519 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 DGKDQ16760 1214 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 SHC4Q6S5L8 630 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 SEPT5Q99719 369 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 HSPBP1Q9NZL4 362 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 DAB2P98082 770 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 PRKCEQ02156 737 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 PDCD2Q16342 344 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 FAM102AQ5T9C2 384 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 PDS5AQ29RF7 1337 aaKnown RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 DGAT1O75907 488 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 EPHX2P34913 555 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 TSGA10IPQ3SY00 556 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 PLA2G4FQ68DD2 849 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 NFKBIL1Q9UBC1 381 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 POLRMTO00411 1230 aaKnown RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 FOXN1O15353 648 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 TTI1O43156 1089 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 TRAPPC3O43617 180 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 CALR3Q96L12 384 aaKnown RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 MOV10L1Q9BXT6 1211 aaKnown RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 JMJD4Q9H9V9 463 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 PPP1R9AQ9ULJ8 1098 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 AGAP1Q9UPQ3 857 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 CHEK2O96017 543 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 TFDP2Q14188 446 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 TMEM132DQ14C87 1099 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 ANKRD20A4Q4UJ75 823 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 ANKRD20A8PQ5CZ79 823 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 ANKRD20A2Q5SQ80 823 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 ANKRD20A1Q5TYW2 823 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 SMAP1Q8IYB5 467 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 PDIK1LQ8N165 341 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 SLC26A7Q8TE54 656 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 RNF25Q96BH1 459 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 RMDN1Q96DB5 314 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 MXRA8Q9BRK3 442 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 SAYSD1Q9NPB0 183 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 EPS15L1Q9UBC2 864 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 FBXO2Q9UK22 296 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-202ENST00000372216 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
COL4A6-202ENST00000372216 FAM205CA6NFA0 338 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 ULK4Q96C45 1275 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 TNIP3Q96KP6 325 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 BPIFA3Q9BQP9 254 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 ZMYND12Q9H0C1 365 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 RASSF4Q9H2L5 321 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 MED4Q9NPJ6 270 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 USP32Q8NFA0 1604 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 IQANK1A0A1B0GTG1 560 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
COL4A6-202ENST00000372216 ARIH2O95376 493 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 ITGA4P13612 1032 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 RFC5P40937 340 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 ACOT2P49753 483 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 SULT1E1P49888 294 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 PAN2Q504Q3 1202 aaKnown RBP10.37□□□□□ -0.75
COL4A6-202ENST00000372216 ENOSF1Q7L5Y1 443 aa10.37□□□□□ -0.75
COL4A6-202ENST00000372216 FRMD5Q7Z6J6 570 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms