RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 REXO1L1PQ8IX06 675 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 GCOM2Q9BZD3 368 aaPredicted RBP28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 ADAMTS10Q9H324 1103 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 IPO7O95373 1038 aaKnown RBP28.49■■■□□ 2.15
ATPAF1-202ENST00000371937 SERPING1P05155 500 aa28.49■■■□□ 2.15
ATPAF1-202ENST00000371937 TNNI1P19237 187 aa28.49■■■□□ 2.15
ATPAF1-202ENST00000371937 IQCEQ6IPM2 695 aa28.49■■■□□ 2.15
ATPAF1-202ENST00000371937 NYAP1Q6ZVC0 841 aa28.49■■■□□ 2.15
ATPAF1-202ENST00000371937 FBXL13Q8NEE6 735 aa28.49■■■□□ 2.15
ATPAF1-202ENST00000371937 STK33Q9BYT3 514 aa28.49■■■□□ 2.15
ATPAF1-202ENST00000371937 ARHGAP20Q9P2F6 1191 aa28.49■■■□□ 2.15
ATPAF1-202ENST00000371937 KIF2AO00139 706 aaPredicted RBP28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 TREHO43280 583 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 OFD1O75665 1012 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 ERLIN2O94905 339 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 JAM2P57087 298 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 HIC1Q14526 733 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 PCBP1Q15365 356 aaKnown RBP eCLIP28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 KIZQ2M2Z5 673 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 ZBTB41Q5SVQ8 909 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 CXCL17Q6UXB2 119 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 RUFY4Q6ZNE9 571 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 SV2AQ7L0J3 742 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 BRSK2Q8IWQ3 736 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 PPP1R13LQ8WUF5 828 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 ZNF296Q8WUU4 475 aaPredicted RBP28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 VTI1AQ96AJ9 217 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 PDE11AQ9HCR9 933 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 DNAJC12Q9UKB3 198 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 SSU72P8A0A1W2PR75 194 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 CST5P28325 142 aaPredicted RBP28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 KRT83P78385 493 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 SURF1Q15526 300 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 ASIC2Q16515 512 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 NME8Q8N427 588 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 DEF6Q9H4E7 631 aa28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 TOPORSQ9NS56 1045 aaPredicted RBP28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 BZW2Q9Y6E2 419 aaKnown RBP28.48■■■□□ 2.15
ATPAF1-202ENST00000371937 EIF3CLB5ME19 914 aaKnown RBP28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 GPR32O75388 356 aa28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 CSDE1O75534 798 aaKnown RBP28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 TUBB4AP04350 444 aa28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 HGSNATQ68CP4 663 aa28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 KLHDC9Q8NEP7 349 aa28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 DNAJB3Q8WWF6 145 aa28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 EIF3CQ99613 913 aaKnown RBP28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 CGRRF1Q99675 332 aa28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 CPSF3Q9UKF6 684 aaKnown RBP28.47■■■□□ 2.15
ATPAF1-202ENST00000371937 MCF2P10911 925 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 STAT1P42224 750 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 NCBP1Q09161 790 aaKnown RBP28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 MAPK8IP2Q13387 824 aaPredicted RBP28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 EEF1DP3Q658K8 133 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 PHLDB3Q6NSJ2 640 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 TAF2Q6P1X5 1199 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 GJB7Q6PEY0 223 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 C15orf39Q6ZRI6 1047 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 PCSK9Q8NBP7 692 aaKnown RBP28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 CDT1Q9H211 546 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 RAB20Q9NX57 234 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 DDX20Q9UHI6 824 aaKnown RBP28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 TNNT1P13805 278 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 EIF4A3P38919 411 aaKnown RBP28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 AP3M2P53677 418 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 KYAT1Q16773 422 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 NBPF20Q3BBV1 942 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 SEZ6Q53EL9 994 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 TDRD12Q587J7 1177 aaKnown RBP28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 SLAIN1Q8ND83 568 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 ACRBPQ8NEB7 543 aa28.46■■■□□ 2.15
ATPAF1-202ENST00000371937 TSPAN1O60635 241 aa28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 PLEKP08567 350 aaPredicted RBP28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 ARF4P18085 180 aaPredicted RBP28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 TNFSF9P41273 254 aa28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 ZNF200P98182 395 aaPredicted RBP28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 KLHL30Q0D2K2 578 aa28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 TMEM62Q0P6H9 643 aa28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 ZNF516Q92618 1163 aa28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 PDZD7Q9H5P4 517 aa28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 GTF2IRD1Q9UHL9 959 aa28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 AJAP1Q9UKB5 411 aaPredicted RBP28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 GINS2Q9Y248 185 aa28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 SCN10AQ9Y5Y9 1956 aa28.45■■■□□ 2.14
ATPAF1-202ENST00000371937 AKR1B10O60218 316 aa28.44■■■□□ 2.14
ATPAF1-202ENST00000371937 ASGR1P07306 291 aa28.44■■■□□ 2.14
ATPAF1-202ENST00000371937 POU5F1Q01860 360 aaKnown RBP28.44■■■□□ 2.14
ATPAF1-202ENST00000371937 SPA17Q15506 151 aa28.44■■■□□ 2.14
ATPAF1-202ENST00000371937 KCNA10Q16322 511 aa28.44■■■□□ 2.14
ATPAF1-202ENST00000371937 ZACNQ401N2 412 aa28.44■■■□□ 2.14
ATPAF1-202ENST00000371937 THNSL1Q8IYQ7 743 aa28.44■■■□□ 2.14
ATPAF1-202ENST00000371937 TAS1R2Q8TE23 839 aa28.44■■■□□ 2.14
ATPAF1-202ENST00000371937 UBE2TQ9NPD8 197 aaPredicted RBP28.44■■■□□ 2.14
ATPAF1-202ENST00000371937 ZC3H11AO75152 810 aaKnown RBP eCLIP28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 CCDC172P0C7W6 258 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 FERP16591 822 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 ARID5AQ03989 594 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 DRAP1Q14919 205 aaPredicted RBP28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 IRF2BP2Q7Z5L9 587 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 RNF180Q86T96 592 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms