RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
RPF1-202ENST00000370656 RUBCNQ92622 972 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 FAM20AQ96MK3 541 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 ANP32EQ9BTT0 268 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 NT5C3AQ9H0P0 336 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 MINDY3Q9H8M7 445 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 IPPQ9Y573 584 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 DNAH14Q0VDD8 3507 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 ARID2Q68CP9 1835 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 CACNA1IQ9P0X4 2223 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 PAPLNO95428 1278 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 DCNP07585 359 aaKnown RBP16.72■□□□□ 0.27
RPF1-202ENST00000370656 SPATA31D3P0C874 917 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 MYBP10242 640 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 MLH1P40692 756 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 DSC1Q08554 894 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 SKOR2Q2VWA4 1001 aaPredicted RBP16.72■□□□□ 0.27
RPF1-202ENST00000370656 USP41Q3LFD5 358 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 MCTP1Q6DN14 999 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 SPATA31D4Q6ZUB0 917 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 GET4Q7L5D6 327 aaPredicted RBP16.72■□□□□ 0.27
RPF1-202ENST00000370656 SMG8Q8ND04 991 aaKnown RBP16.72■□□□□ 0.27
RPF1-202ENST00000370656 ZNF707Q96C28 371 aaPredicted RBP16.72■□□□□ 0.27
RPF1-202ENST00000370656 AIFM3Q96NN9 605 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 GAD1Q99259 594 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 PRKD2Q9BZL6 878 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 TRIM6Q9C030 488 aaPredicted RBP16.72■□□□□ 0.27
RPF1-202ENST00000370656 SLC2A4RGQ9NR83 387 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 CHST7Q9NS84 486 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 FNIP2Q9P278 1114 aa16.72■□□□□ 0.27
RPF1-202ENST00000370656 TGM5O43548 720 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 EFEMP2O95967 443 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 SP9P0CG40 484 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 DNM1Q05193 864 aaKnown RBP16.71■□□□□ 0.27
RPF1-202ENST00000370656 TFDP1Q14186 410 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 MXD4Q14582 209 aaPredicted RBP16.71■□□□□ 0.27
RPF1-202ENST00000370656 EMC2Q15006 297 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 KRT25Q7Z3Z0 450 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 FERMT3Q86UX7 667 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 DAGLBQ8NCG7 672 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 BORCS6Q96GS4 357 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 GIT1Q9Y2X7 761 aa16.71■□□□□ 0.27
RPF1-202ENST00000370656 ANHXE9PGG2 379 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 EML1O00423 815 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 MARCH6O60337 910 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 YWHABP31946 246 aaKnown RBP16.7■□□□□ 0.26
RPF1-202ENST00000370656 SCNN1GP51170 649 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 HTR4Q13639 388 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 INF2Q27J81 1249 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 C4orf19Q8IY42 314 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 PJA1Q8NG27 643 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 CHAMP1Q96JM3 812 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 MTRQ99707 1265 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 PHF20Q9BVI0 1012 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 SCAND2PQ9GZW5 306 aaPredicted RBP16.7■□□□□ 0.26
RPF1-202ENST00000370656 CSRNP2Q9H175 543 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 FOXP1Q9H334 677 aaPredicted RBP16.7■□□□□ 0.26
RPF1-202ENST00000370656 BMP2KQ9NSY1 1161 aaPredicted RBP16.7■□□□□ 0.26
RPF1-202ENST00000370656 GJB4Q9NTQ9 266 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 DLGAP2Q9P1A6 1054 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 ADAM28Q9UKQ2 775 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 VAV3Q9UKW4 847 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 NUMBLQ9Y6R0 609 aa16.7■□□□□ 0.26
RPF1-202ENST00000370656 CCDC194A0A1B0GVG4 234 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 INO80B-WBP1J3KQ70 363 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 M0R2N6 131 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 SLC37A4O43826 429 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 TSPAN1O60635 241 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 KINO60870 393 aaKnown RBP16.69■□□□□ 0.26
RPF1-202ENST00000370656 KRT37O76014 449 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 GCFC2P16383 781 aaKnown RBP16.69■□□□□ 0.26
RPF1-202ENST00000370656 XBP1P17861 261 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 FSHRP23945 695 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 PTENP60484 403 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 KRT85P78386 507 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 TRIM29Q14134 588 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 XKR9Q5GH70 373 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 FUT10Q6P4F1 479 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 GLYCTKQ8IVS8 523 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 ZNF579Q8NAF0 562 aaKnown RBP16.69■□□□□ 0.26
RPF1-202ENST00000370656 ZFP42Q96MM3 310 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 NAP1L4Q99733 375 aaKnown RBP16.69■□□□□ 0.26
RPF1-202ENST00000370656 LXNQ9BS40 222 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 APOL6Q9BWW8 343 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 EIF2AQ9BY44 585 aaKnown RBP16.69■□□□□ 0.26
RPF1-202ENST00000370656 RCOR1Q9UKL0 485 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 DOCK6Q96HP0 2047 aa16.69■□□□□ 0.26
RPF1-202ENST00000370656 TRAK2O60296 914 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 TADA2AO75478 443 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 ZMYND10O75800 440 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 STARD6P59095 220 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 GUCY1B3Q02153 619 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 NBR1Q14596 966 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 EPHA7Q15375 998 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 NPY5RQ15761 445 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 LIN9Q5TKA1 542 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 PPP4R3AQ6IN85 833 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 LILRA6Q6PI73 481 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 MTSS1LQ765P7 747 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 NEK8Q86SG6 692 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms