RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TTC8Q8TAM2 541 aa20.83■□□□□ 0.92
LMO4-202ENST00000370544 CHP1Q99653 195 aa20.83■□□□□ 0.92
LMO4-202ENST00000370544 MXRA8Q9BRK3 442 aa20.83■□□□□ 0.92
LMO4-202ENST00000370544 EPC1Q9H2F5 836 aa20.83■□□□□ 0.92
LMO4-202ENST00000370544 FAM96AQ9H5X1 160 aa20.83■□□□□ 0.92
LMO4-202ENST00000370544 BEND6Q5SZJ8 279 aaPredicted RBP20.83■□□□□ 0.92
LMO4-202ENST00000370544 SPATA4Q8NEY3 305 aa20.83■□□□□ 0.92
LMO4-202ENST00000370544 HACD3Q9P035 362 aa20.83■□□□□ 0.92
LMO4-202ENST00000370544 SUN2Q9UH99 717 aa20.83■□□□□ 0.92
LMO4-202ENST00000370544 UCHL3P15374 230 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 CDC42EP1Q00587 391 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 TBC1D1Q86TI0 1168 aaPredicted RBP20.82■□□□□ 0.92
LMO4-202ENST00000370544 ZBTB18Q99592 522 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 USP32Q8NFA0 1604 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 TARSL2A2RTX5 802 aaKnown RBP20.82■□□□□ 0.92
LMO4-202ENST00000370544 DRC3Q9H069 523 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 SIK2Q9H0K1 926 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 GTSE1Q9NYZ3 720 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 GGA3Q9NZ52 723 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 BFARQ9NZS9 450 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 THEGQ9P2T0 379 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 SNAPC2Q13487 334 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 NR1I3Q14994 352 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 EDRF1Q3B7T1 1238 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 USP49Q70CQ1 688 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 UPF3AQ9H1J1 476 aaKnown RBP20.82■□□□□ 0.92
LMO4-202ENST00000370544 IRAK4Q9NWZ3 460 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 MAD2L2Q9UI95 211 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 FSCBQ5H9T9 825 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 ACAD11Q709F0 780 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 CERKQ8TCT0 537 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 MYOZ2Q9NPC6 264 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 SNX12Q9UMY4 172 aa20.82■□□□□ 0.92
LMO4-202ENST00000370544 CCDC195A0A1B0GUA6 201 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 GH1P01241 217 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 ARSEP51690 589 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 PRKCEQ02156 737 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 SLC35G2Q8TBE7 412 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 TRIM15Q9C019 465 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 TMEM39BQ9GZU3 492 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.81■□□□□ 0.92
LMO4-202ENST00000370544 SSU72P8A0A1W2PR75 194 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 FRMD3A2A2Y4 597 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 BRAFP15056 766 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 GUCY2CP25092 1073 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 RFC5P40937 340 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 FXR2P51116 673 aaKnown RBP eCLIP20.81■□□□□ 0.92
LMO4-202ENST00000370544 RBP5P82980 135 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 PLA2G4FQ68DD2 849 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 ZC3H18Q86VM9 953 aaKnown RBP20.81■□□□□ 0.92
LMO4-202ENST00000370544 MOV10L1Q9BXT6 1211 aaKnown RBP20.81■□□□□ 0.92
LMO4-202ENST00000370544 SPON1Q9HCB6 807 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 MLXIPLQ9NP71 852 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 AMACRQ9UHK6 382 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 HPS5Q9UPZ3 1129 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 PHEXP78562 749 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 CDK17Q00537 523 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 MDM2Q00987 491 aaPredicted RBP20.81■□□□□ 0.92
LMO4-202ENST00000370544 C18orf8Q96DM3 657 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 FBXL5Q9UKA1 691 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 KITP10721 976 aa20.81■□□□□ 0.92
LMO4-202ENST00000370544 POLRMTO00411 1230 aaKnown RBP20.8■□□□□ 0.92
LMO4-202ENST00000370544 NCOA4Q13772 614 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 NCAPHQ15003 741 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 HABP4Q5JVS0 413 aaKnown RBP20.8■□□□□ 0.92
LMO4-202ENST00000370544 SLC30A5Q8TAD4 765 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 CPA5Q8WXQ8 436 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 RIT2Q99578 217 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 AGPAT5Q9NUQ2 364 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 TAF11Q15544 211 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 ZC2HC1CQ53FD0 456 aaPredicted RBP20.8■□□□□ 0.92
LMO4-202ENST00000370544 UVRAGQ9P2Y5 699 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 ZFP69BQ9UJL9 534 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 TPX2Q9ULW0 747 aaKnown RBP20.8■□□□□ 0.92
LMO4-202ENST00000370544 DPYSL4O14531 572 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 EIF3DO15371 548 aaKnown RBP eCLIP20.8■□□□□ 0.92
LMO4-202ENST00000370544 ATXN8OSP0DMR3 200 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 CCZ1BP86790 482 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 CCZ1P86791 482 aaPredicted RBP20.8■□□□□ 0.92
LMO4-202ENST00000370544 TMEM132DQ14C87 1099 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 APPL2Q8NEU8 664 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 ATP6V1G3Q96LB4 118 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.8■□□□□ 0.92
LMO4-202ENST00000370544 HACL1Q9UJ83 578 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 PPP1R12AO14974 1030 aaPredicted RBP20.8■□□□□ 0.92
LMO4-202ENST00000370544 SULT1E1P49888 294 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 GMPSP49915 693 aaPredicted RBP20.8■□□□□ 0.92
LMO4-202ENST00000370544 GIPC2Q8TF65 315 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 KLHL11Q9NVR0 708 aa20.8■□□□□ 0.92
LMO4-202ENST00000370544 ZBBXA8MT70 800 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 DFFAO00273 331 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 PIK3R2O00459 728 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 RALAP11233 206 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 KLRK1P26718 216 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 EIF3EP60228 445 aaKnown RBP20.79■□□□□ 0.92
LMO4-202ENST00000370544 RCOR2Q8IZ40 523 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 MAP3K20Q9NYL2 800 aaKnown RBP20.79■□□□□ 0.92
LMO4-202ENST00000370544 SNX9Q9Y5X1 595 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 TRPA1O75762 1119 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 GALCP54803 685 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms