RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 GALK1P51570 392 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 KLRC3Q07444 240 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 NR5A1Q13285 461 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 KIF22Q14807 665 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 TREML2Q5T2D2 321 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 ZNF654Q8IZM8 581 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 CPXCR1Q8N123 301 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 RNF10Q8N5U6 811 aaKnown RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 GATA6Q92908 595 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 CCDC42Q96M95 316 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 BTBD7Q9P203 1132 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 TDRKHQ9Y2W6 561 aaKnown RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 PCDHB6Q9Y5E3 794 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 NAV1Q8NEY1 1877 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 DDX60LQ5H9U9 1706 aaKnown RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 TTLL1O95922 423 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 TPBGLP0DKB5 382 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 CYP2C8P10632 490 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 KIF11P52732 1056 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 C2orf54Q08AI8 447 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 ZC2HC1CQ53FD0 456 aaPredicted RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 PAPD7Q5XG87 772 aaKnown RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 OSTM1Q86WC4 334 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 TMTC1Q8IUR5 882 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 NEDD1Q8NHV4 660 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 CSRNP2Q9H175 543 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 GUCA1BQ9UMX6 200 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 MAST2Q6P0Q8 1798 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 SH3BP5O60239 455 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 DGKIO75912 1065 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 ATP1A1P05023 1023 aaKnown RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 ZNF131P52739 623 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 RCN2Q14257 317 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 PLS1Q14651 629 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 TMEM259Q4ZIN3 620 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 DEPDC1Q5TB30 811 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 TMEM179Q6ZVK1 233 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 SMYD4Q8IYR2 804 aaPredicted RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 ANKRD13AQ8IZ07 590 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 SCYL3Q8IZE3 742 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 KIF2BQ8N4N8 673 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 FAM133AQ8N9E0 248 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 RBBP8NLQ8NC74 664 aaPredicted RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 CAGE1Q8TC20 777 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 STK32AQ8WU08 396 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 LRRC45Q96CN5 670 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 KLHL29Q96CT2 875 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 XPO6Q96QU8 1125 aaKnown RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 PLCB1Q9NQ66 1216 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 COMMD8Q9NX08 183 aa11.59□□□□□ -0.55
TWNK-202ENST00000370228 FBXO2Q9UK22 296 aaPredicted RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 DIS3Q9Y2L1 958 aaKnown RBP11.59□□□□□ -0.55
TWNK-202ENST00000370228 PITPNM2Q9BZ72 1349 aa11.58□□□□□ -0.55
TWNK-202ENST00000370228 PDE2AO00408 941 aaPredicted RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 CTNND1O60716 968 aaKnown RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 MFAP3LO75121 409 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 DEXIO95424 95 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 NDUFB10O96000 172 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 MDM2Q00987 491 aaPredicted RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 MUM1Q2TAK8 710 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 LIN52Q52LA3 116 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 COBLL1Q53SF7 1204 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 SIX5Q8N196 739 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 MMGT1Q8N4V1 131 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 CCDC127Q96BQ5 260 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 MPP4Q96JB8 637 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 VPS16Q9H269 839 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 FOXP1Q9H334 677 aaPredicted RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 KANSL2Q9H9L4 492 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 TMA7Q9Y2S6 64 aaKnown RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 ECM29Q5VYK3 1845 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 PRPF3O43395 683 aaKnown RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 HSPA1AP0DMV8 641 aaKnown RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 HSPA1BP0DMV9 641 aaKnown RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 IFNAR1P17181 557 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 TNFRSF8P28908 595 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 PTDSS1P48651 473 aaKnown RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 SEC23AQ15436 765 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 CRY1Q16526 586 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 IQCEQ6IPM2 695 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 SPATA24Q86W54 205 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 PPFIBP2Q8ND30 876 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 CCDC51Q96ER9 411 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 CHMP6Q96FZ7 201 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 ZNF333Q96JL9 665 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 TMBIM4Q9HC24 238 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 SEC63Q9UGP8 760 aaKnown RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 MTUS1Q9ULD2 1270 aa11.58□□□□□ -0.56
TWNK-202ENST00000370228 SRPRBQ9Y5M8 271 aaKnown RBP11.58□□□□□ -0.56
TWNK-202ENST00000370228 UBOX5O94941 541 aa11.57□□□□□ -0.56
TWNK-202ENST00000370228 CYP1A2P05177 515 aa11.57□□□□□ -0.56
TWNK-202ENST00000370228 TKTP29401 623 aaKnown RBP11.57□□□□□ -0.56
TWNK-202ENST00000370228 SERPINB3P29508 390 aa11.57□□□□□ -0.56
TWNK-202ENST00000370228 SERPINB8P50452 374 aa11.57□□□□□ -0.56
TWNK-202ENST00000370228 EMP3P54852 163 aa11.57□□□□□ -0.56
TWNK-202ENST00000370228 PPARDQ03181 441 aa11.57□□□□□ -0.56
TWNK-202ENST00000370228 SLFN13Q68D06 897 aa11.57□□□□□ -0.56
TWNK-202ENST00000370228 CCDC174Q6PII3 467 aa11.57□□□□□ -0.56
TWNK-202ENST00000370228 USP49Q70CQ1 688 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms