RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 EPC2Q52LR7 807 aa25.92■■□□□ 1.74
SNX3-203ENST00000368979 SEZ6Q53EL9 994 aa25.92■■□□□ 1.74
SNX3-203ENST00000368979 SERINC5Q86VE9 423 aa25.92■■□□□ 1.74
SNX3-203ENST00000368979 CDR2LQ86X02 465 aaPredicted RBP25.92■■□□□ 1.74
SNX3-203ENST00000368979 LMO3Q8TAP4 145 aa25.92■■□□□ 1.74
SNX3-203ENST00000368979 CPB2Q96IY4 423 aa25.92■■□□□ 1.74
SNX3-203ENST00000368979 POP1Q99575 1024 aaKnown RBP25.92■■□□□ 1.74
SNX3-203ENST00000368979 TOPORSQ9NS56 1045 aaPredicted RBP25.92■■□□□ 1.74
SNX3-203ENST00000368979 HTTP42858 3142 aa25.91■■□□□ 1.74
SNX3-203ENST00000368979 MCF2P10911 925 aa25.91■■□□□ 1.74
SNX3-203ENST00000368979 EIF4BP23588 611 aaKnown RBP25.91■■□□□ 1.74
SNX3-203ENST00000368979 CRYBB1P53674 252 aaPredicted RBP25.91■■□□□ 1.74
SNX3-203ENST00000368979 POLR2FP61218 127 aaKnown RBP25.91■■□□□ 1.74
SNX3-203ENST00000368979 PTPN11Q06124 597 aaPredicted RBP25.91■■□□□ 1.74
SNX3-203ENST00000368979 ITGA7Q13683 1181 aa25.91■■□□□ 1.74
SNX3-203ENST00000368979 SNX17Q15036 470 aa25.91■■□□□ 1.74
SNX3-203ENST00000368979 MEA1Q16626 185 aa25.91■■□□□ 1.74
SNX3-203ENST00000368979 KRT39Q6A163 491 aa25.91■■□□□ 1.74
SNX3-203ENST00000368979 INTS2Q9H0H0 1204 aaKnown RBP25.91■■□□□ 1.74
SNX3-203ENST00000368979 A0A1B0GUA9 196 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 DLATP10515 647 aaKnown RBP25.9■■□□□ 1.74
SNX3-203ENST00000368979 UCHL3P15374 230 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 FGFR4P22455 802 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 HNRNPH3P31942 346 aaKnown RBP25.9■■□□□ 1.74
SNX3-203ENST00000368979 CETN1Q12798 172 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 PDXDC1Q6P996 788 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 CACNA2D4Q7Z3S7 1137 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 RPAINQ86UA6 219 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 EHBP1Q8NDI1 1231 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 TMEM40Q8WWA1 233 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 UNC93B1Q9H1C4 597 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 PDE11AQ9HCR9 933 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 COQ4Q9Y3A0 265 aa25.9■■□□□ 1.74
SNX3-203ENST00000368979 LRRC53A6NM62 1247 aa25.89■■□□□ 1.74
SNX3-203ENST00000368979 RPLP2P05387 115 aaKnown RBP25.89■■□□□ 1.74
SNX3-203ENST00000368979 MRPS6P82932 125 aaKnown RBP25.89■■□□□ 1.74
SNX3-203ENST00000368979 COL13A1Q5TAT6 717 aaPredicted RBP25.89■■□□□ 1.74
SNX3-203ENST00000368979 WDR59Q6PJI9 974 aa25.89■■□□□ 1.74
SNX3-203ENST00000368979 C15orf39Q6ZRI6 1047 aa25.89■■□□□ 1.74
SNX3-203ENST00000368979 WNT8BQ93098 351 aa25.89■■□□□ 1.74
SNX3-203ENST00000368979 FNBP1Q96RU3 617 aa25.89■■□□□ 1.74
SNX3-203ENST00000368979 CGRRF1Q99675 332 aa25.89■■□□□ 1.74
SNX3-203ENST00000368979 NLRC4Q9NPP4 1024 aa25.89■■□□□ 1.74
SNX3-203ENST00000368979 PLAGL2Q9UPG8 496 aa25.89■■□□□ 1.74
SNX3-203ENST00000368979 DAAM1Q9Y4D1 1078 aa25.89■■□□□ 1.74
SNX3-203ENST00000368979 ZNF500O60304 480 aaPredicted RBP25.88■■□□□ 1.73
SNX3-203ENST00000368979 TSR1Q2NL82 804 aaKnown RBP25.88■■□□□ 1.73
SNX3-203ENST00000368979 SV2AQ7L0J3 742 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 RRAGAQ7L523 313 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 CATSPER4Q7RTX7 472 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 RSPH3Q86UC2 560 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 TMTC1Q8IUR5 882 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 THNSL1Q8IYQ7 743 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 CEP120Q8N960 986 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 ARRDC4Q8NCT1 418 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 ZNF516Q92618 1163 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 GLT1D1Q96MS3 346 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 CELF4Q9BZC1 486 aaKnown RBP25.88■■□□□ 1.73
SNX3-203ENST00000368979 PAK6Q9NQU5 681 aaPredicted RBP25.88■■□□□ 1.73
SNX3-203ENST00000368979 FHOD1Q9Y613 1164 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 PTPRJQ12913 1337 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 HOXA11P31270 313 aaPredicted RBP25.88■■□□□ 1.73
SNX3-203ENST00000368979 PTGISQ16647 500 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 E4F1Q66K89 784 aaPredicted RBP25.88■■□□□ 1.73
SNX3-203ENST00000368979 CYP26C1Q6V0L0 522 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 C17orf53Q8N3J3 647 aaPredicted RBP25.88■■□□□ 1.73
SNX3-203ENST00000368979 NUCKS1Q9H1E3 243 aaKnown RBP25.88■■□□□ 1.73
SNX3-203ENST00000368979 TRPV2Q9Y5S1 764 aa25.88■■□□□ 1.73
SNX3-203ENST00000368979 A0A1W2PQ45 241 aaPredicted RBP25.87■■□□□ 1.73
SNX3-203ENST00000368979 A0A1W2PQY0 241 aa25.87■■□□□ 1.73
SNX3-203ENST00000368979 SOWAHDA6NJG2 315 aa25.87■■□□□ 1.73
SNX3-203ENST00000368979 POU5F1Q01860 360 aaKnown RBP25.87■■□□□ 1.73
SNX3-203ENST00000368979 SLC9C1Q4G0N8 1177 aa25.87■■□□□ 1.73
SNX3-203ENST00000368979 VTI1AQ96AJ9 217 aa25.87■■□□□ 1.73
SNX3-203ENST00000368979 APEX2Q9UBZ4 518 aa25.87■■□□□ 1.73
SNX3-203ENST00000368979 AJAP1Q9UKB5 411 aaPredicted RBP25.87■■□□□ 1.73
SNX3-203ENST00000368979 PHF24Q9UPV7 400 aa25.87■■□□□ 1.73
SNX3-203ENST00000368979 C4BPAP04003 597 aaKnown RBP25.86■■□□□ 1.73
SNX3-203ENST00000368979 HSPA1AP0DMV8 641 aaKnown RBP25.86■■□□□ 1.73
SNX3-203ENST00000368979 HSPA1BP0DMV9 641 aaKnown RBP25.86■■□□□ 1.73
SNX3-203ENST00000368979 TNNI1P19237 187 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 AXLP30530 894 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 CDK17Q00537 523 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 NCBP1Q09161 790 aaKnown RBP25.86■■□□□ 1.73
SNX3-203ENST00000368979 SURF1Q15526 300 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 ENOX2Q16206 610 aaKnown RBP25.86■■□□□ 1.73
SNX3-203ENST00000368979 KYAT1Q16773 422 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 IQCEQ6IPM2 695 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 RAD9BQ6WBX8 426 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 SLC43A3Q8NBI5 491 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 SYN2Q92777 582 aaPredicted RBP25.86■■□□□ 1.73
SNX3-203ENST00000368979 ADPGKQ9BRR6 497 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 KCND1Q9NSA2 647 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 ZNHIT6Q9NWK9 470 aaKnown RBP25.86■■□□□ 1.73
SNX3-203ENST00000368979 MYO6Q9UM54 1294 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 CDY2AQ9Y6F7 541 aa25.86■■□□□ 1.73
SNX3-203ENST00000368979 M0QZ92 97 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 RFX1P22670 979 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 JAM2P57087 298 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 MGAT3Q09327 533 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms