RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 BRWD1Q9NSI6 2320 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 FRMD3A2A2Y4 597 aa20.27■□□□□ 0.84
CHTOP-202ENST00000368687 POLR2DO15514 142 aaKnown RBP20.27■□□□□ 0.84
CHTOP-202ENST00000368687 SCNN1GP51170 649 aa20.27■□□□□ 0.84
CHTOP-202ENST00000368687 TJAP1Q5JTD0 557 aa20.27■□□□□ 0.84
CHTOP-202ENST00000368687 DDX53Q86TM3 631 aaKnown RBP20.27■□□□□ 0.84
CHTOP-202ENST00000368687 MAP4K3Q8IVH8 894 aa20.27■□□□□ 0.84
CHTOP-202ENST00000368687 IGSF21Q96ID5 467 aa20.27■□□□□ 0.84
CHTOP-202ENST00000368687 ZFP42Q96MM3 310 aa20.27■□□□□ 0.84
CHTOP-202ENST00000368687 CDCA3Q99618 268 aaPredicted RBP20.27■□□□□ 0.84
CHTOP-202ENST00000368687 MRPL44Q9H9J2 332 aaKnown RBP20.27■□□□□ 0.84
CHTOP-202ENST00000368687 SNTG2Q9NY99 539 aa20.27■□□□□ 0.84
CHTOP-202ENST00000368687 CIZ1Q9ULV3 898 aaPredicted RBP20.27■□□□□ 0.84
CHTOP-202ENST00000368687 EXOC7Q9UPT5 735 aa20.27■□□□□ 0.84
CHTOP-202ENST00000368687 FAN1Q9Y2M0 1017 aa20.27■□□□□ 0.84
CHTOP-202ENST00000368687 THP07101 528 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 IDEP14735 1019 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 TFF2Q03403 129 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 MCL1Q07820 350 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 CAMK1Q14012 370 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 HERC4Q5GLZ8 1057 aaPredicted RBP20.26■□□□□ 0.83
CHTOP-202ENST00000368687 TCEAL5Q5H9L2 206 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 ZNF720Q7Z2F6 126 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 SFR1Q86XK3 245 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 ZNF280BQ86YH2 543 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 COLGALT2Q8IYK4 626 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 MICAL1Q8TDZ2 1067 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 ASB2Q96Q27 587 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 FIZ1Q96SL8 496 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 ENTPD7Q9NQZ7 604 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 PANK4Q9NVE7 773 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 ANKFY1Q9P2R3 1169 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 PCDHB13Q9Y5F0 798 aa20.26■□□□□ 0.83
CHTOP-202ENST00000368687 A0A1W2PQ27 194 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 A0A1W2PQ64 194 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 A0A1W2PQD8 194 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 FSCN2O14926 492 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 MYL1P05976 194 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 DNAJB1P25685 340 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 PBX3P40426 434 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 MATR3P43243 847 aaKnown RBP eCLIP20.25■□□□□ 0.83
CHTOP-202ENST00000368687 SLC11A1P49279 550 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 MRPS5P82675 430 aaKnown RBP20.25■□□□□ 0.83
CHTOP-202ENST00000368687 TUSC3Q13454 348 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 SMC1AQ14683 1233 aaKnown RBP20.25■□□□□ 0.83
CHTOP-202ENST00000368687 COL19A1Q14993 1142 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 SLFN12LQ6IEE8 588 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 GSTCDQ8NEC7 633 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 PABPC5Q96DU9 382 aaKnown RBP20.25■□□□□ 0.83
CHTOP-202ENST00000368687 CCDC34Q96HJ3 373 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 ACAP3Q96P50 834 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 TCF25Q9BQ70 676 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 COLEC11Q9BWP8 271 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 TRIM9Q9C026 710 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 SLC38A7Q9NVC3 462 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 DNAJB4Q9UDY4 337 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 USP20Q9Y2K6 914 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 GDAQ9Y2T3 454 aa20.25■□□□□ 0.83
CHTOP-202ENST00000368687 ABLIM1O14639 778 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 DDHD2O94830 711 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 SLFN14P0C7P3 912 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 SRGAP2BP0DMP2 458 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 AFF1P51825 1210 aaKnown RBP20.24■□□□□ 0.83
CHTOP-202ENST00000368687 TMC7Q7Z402 723 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 TSPAN18Q96SJ8 248 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 C7orf25Q9BPX7 421 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 PLEKHA5Q9HAU0 1116 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 KLK14Q9P0G3 267 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 SSX2IPQ9Y2D8 614 aa20.24■□□□□ 0.83
CHTOP-202ENST00000368687 TRIP11Q15643 1979 aa20.23■□□□□ 0.83
CHTOP-202ENST00000368687 NRP1O14786 923 aa20.23■□□□□ 0.83
CHTOP-202ENST00000368687 PPP1R37O75864 691 aa20.23■□□□□ 0.83
CHTOP-202ENST00000368687 NMT1P30419 496 aaKnown RBP20.23■□□□□ 0.83
CHTOP-202ENST00000368687 OR1G1P47890 313 aa20.23■□□□□ 0.83
CHTOP-202ENST00000368687 ASIC1P78348 528 aa20.23■□□□□ 0.83
CHTOP-202ENST00000368687 POSTNQ15063 836 aa20.23■□□□□ 0.83
CHTOP-202ENST00000368687 ZBTB33Q86T24 672 aa20.23■□□□□ 0.83
CHTOP-202ENST00000368687 UROC1Q96N76 676 aa20.23■□□□□ 0.83
CHTOP-202ENST00000368687 IRAK3Q9Y616 596 aa20.23■□□□□ 0.83
CHTOP-202ENST00000368687 FAM237AA0A1B0GTK4 181 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 NT5C1B-RDH14C9J2C7 533 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 GCNT3O95395 438 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 CLTAP09496 248 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 PFKFB1P16118 471 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 POU5F1Q01860 360 aaKnown RBP20.22■□□□□ 0.83
CHTOP-202ENST00000368687 XKR4Q5GH76 650 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 L1TD1Q5T7N2 865 aaKnown RBP20.22■□□□□ 0.83
CHTOP-202ENST00000368687 VPS52Q8N1B4 723 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 SNX27Q96L92 541 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 ACCSQ96QU6 501 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 TLE6Q9H808 572 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 TMEM206Q9H813 350 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 UBE2ZQ9H832 354 aaPredicted RBP20.22■□□□□ 0.83
CHTOP-202ENST00000368687 MIOSQ9NXC5 875 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 HPSEQ9Y251 543 aa20.22■□□□□ 0.83
CHTOP-202ENST00000368687 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.21■□□□□ 0.83
CHTOP-202ENST00000368687 PVALEFA0A1B0GWK0 134 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 GOLGA6L4A6NEF3 574 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 PTGESO14684 152 aa20.21■□□□□ 0.83
CHTOP-202ENST00000368687 OGTO15294 1046 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms