RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 SH3KBP1Q96B97 665 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 MAP3K20Q9NYL2 800 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 CPSF2Q9P2I0 782 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 USP31Q70CQ4 1352 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 MYMKA6NI61 221 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 ANP32DO95626 131 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 RALAP11233 206 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 INPP1P49441 399 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 COPS2P61201 443 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 ANKRD20A4Q4UJ75 823 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 ANKRD20A8PQ5CZ79 823 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 ANKRD20A2Q5SQ80 823 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 ANKRD20A1Q5TYW2 823 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 PARVAQ9NVD7 372 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 CSF1RP07333 972 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 MAGOHP61326 146 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 NAA30Q147X3 362 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 CC2D1AQ6P1N0 951 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 SARM1Q6SZW1 724 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 SPATS2Q86XZ4 545 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 TTC13Q8NBP0 860 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 PBXIP1Q96AQ6 731 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 CNOT10Q9H9A5 744 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 GPBP1L1Q9HC44 474 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 ZC3H4Q9UPT8 1303 aaKnown RBP13.66□□□□□ -0.22
PTPRK-207ENST00000368226 CCDC188H7C350 402 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 APOL1O14791 398 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 SCP2P22307 547 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 XKR3Q5GH77 459 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 UBA3Q8TBC4 463 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 ULK4Q96C45 1275 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 SMARCAD1Q9H4L7 1026 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 CYP26B1Q9NR63 512 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 KLK14Q9P0G3 267 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 SYF2O95926 243 aaKnown RBP13.66□□□□□ -0.22
PTPRK-207ENST00000368226 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 OR1G1P47890 313 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 NT5C2P49902 561 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 NPEPPSP55786 919 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 SESN2P58004 480 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-207ENST00000368226 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 CCDC151A5D8V7 595 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 KCNN4O15554 427 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 ARSEP51690 589 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 TPI1P60174 286 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 ORC1Q13415 861 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 SNRNP35Q16560 246 aaKnown RBP13.66□□□□□ -0.22
PTPRK-207ENST00000368226 BEND6Q5SZJ8 279 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-207ENST00000368226 ALS2CLQ60I27 953 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 FAM151AQ8WW52 585 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 SEPT1Q8WYJ6 367 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 LPAR1Q92633 364 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 ZCWPW1Q9H0M4 648 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 IL25Q9H293 177 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 TMEM60Q9H2L4 133 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 LIMA1Q9UHB6 759 aaKnown RBP13.66□□□□□ -0.22
PTPRK-207ENST00000368226 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 H3BRJ5 948 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 EFNA5P52803 228 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 NCAPHQ15003 741 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 THEMIS2Q5TEJ8 643 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 MMS22LQ6ZRQ5 1243 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 TBC1D1Q86TI0 1168 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-207ENST00000368226 TTC8Q8TAM2 541 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 E9PCH4 1651 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 CPS1P31327 1500 aa13.66□□□□□ -0.22
PTPRK-207ENST00000368226 C19orf81C9J6K1 198 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 GOLGA8RI6L899 631 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 NCOA4Q13772 614 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 HHIPL2Q6UWX4 724 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 PGBD4Q96DM1 585 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 TRIM10Q9UDY6 481 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 DIS3Q9Y2L1 958 aaKnown RBP13.65□□□□□ -0.22
PTPRK-207ENST00000368226 RRP15Q9Y3B9 282 aaKnown RBP13.65□□□□□ -0.22
PTPRK-207ENST00000368226 CAMSAP1Q5T5Y3 1602 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 KRT7P08729 469 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 KRT17Q04695 432 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 IZUMO3Q5VZ72 239 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 ENTPD3O75355 529 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 NFKBIAP25963 317 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 CDK17Q00537 523 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 SPARCL1Q14515 664 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 MGAT5BQ3V5L5 792 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 GLRA4Q5JXX5 417 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 RASIP1Q5U651 963 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 CHP1Q99653 195 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 NYAP2Q9P242 653 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 MGEA5O60502 916 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 DIAPH2O60879 1101 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 DGAT1O75907 488 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 NPTXRO95502 500 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 PGK2P07205 417 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 HOXA7P31268 230 aaPredicted RBP13.65□□□□□ -0.22
PTPRK-207ENST00000368226 EIF3EP60228 445 aaKnown RBP13.65□□□□□ -0.22
PTPRK-207ENST00000368226 PCSK7Q16549 785 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms