RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 BMS1Q14692 1282 aaKnown RBP10.82□□□□□ -0.68
CD48-202ENST00000368046 COL19A1Q14993 1142 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 CTC1Q2NKJ3 1217 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 DCAF4L1Q3SXM0 396 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 ZPBP2Q6X784 338 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 TAS1R3Q7RTX0 852 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 DDX53Q86TM3 631 aaKnown RBP10.82□□□□□ -0.68
CD48-202ENST00000368046 KCNG4Q8TDN1 519 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 IGSF21Q96ID5 467 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 ZFP42Q96MM3 310 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 TARS2Q9BW92 718 aaKnown RBP10.82□□□□□ -0.68
CD48-202ENST00000368046 IGFLR1Q9H665 355 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 UBE2ZQ9H832 354 aaPredicted RBP10.82□□□□□ -0.68
CD48-202ENST00000368046 PARVGQ9HBI0 331 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 KLK14Q9P0G3 267 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 LHX6Q9UPM6 363 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 ARID2Q68CP9 1835 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 ZMYM2Q9UBW7 1377 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 FSCN2O14926 492 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 TOM1L1O75674 476 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 CXCL14O95715 111 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 MCF2P10911 925 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 BMP1P13497 986 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 ABCD1P33897 745 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 STAT6P42226 847 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 OR1G1P47890 313 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 DSC1Q08554 894 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 AXDND1Q5T1B0 1012 aaPredicted RBP10.81□□□□□ -0.68
CD48-202ENST00000368046 RBM23Q86U06 439 aaKnown RBP10.81□□□□□ -0.68
CD48-202ENST00000368046 COLGALT2Q8IYK4 626 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 MRPL43Q8N983 215 aaKnown RBP10.81□□□□□ -0.68
CD48-202ENST00000368046 DDX12PQ92771 950 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 TCF25Q9BQ70 676 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 COLEC11Q9BWP8 271 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 LRRC27Q9C0I9 530 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 ZHX3Q9H4I2 956 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 TLE6Q9H808 572 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 PCDHA7Q9UN72 937 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 ATP6V1DQ9Y5K8 247 aa10.81□□□□□ -0.68
CD48-202ENST00000368046 PRRC2BQ5JSZ5 2229 aaKnown RBP10.81□□□□□ -0.68
CD48-202ENST00000368046 MYO9BQ13459 2157 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 A0A087X0B3 334 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 MYMKA6NI61 221 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 DLL1O00548 723 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 CLDN3O15551 220 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 B4GALT3O60512 393 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 TBCAO75347 108 aaKnown RBP10.8□□□□□ -0.68
CD48-202ENST00000368046 CSPG5O95196 566 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 THP07101 528 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 KCNA5P22460 613 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 PROZP22891 400 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 LTBRP36941 435 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 GRM5P41594 1212 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 ME1P48163 572 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 NRIP1P48552 1158 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 GTF2BQ00403 316 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 GRIK3Q13003 919 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 LEXMQ3ZCV2 418 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 SHC4Q6S5L8 630 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 MPZL3Q6UWV2 235 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 EP400NLQ6ZTU2 488 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 DYMQ7RTS9 669 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 ZNF720Q7Z2F6 126 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 ADGRD2Q7Z7M1 963 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 TMEM173Q86WV6 379 aaPredicted RBP10.8□□□□□ -0.68
CD48-202ENST00000368046 FAM178BQ8IXR5 827 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 VPS52Q8N1B4 723 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 EFHBQ8N7U6 833 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 PDILTQ8N807 584 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 IQUBQ8NA54 791 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 DNAJC19Q96DA6 116 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 ZBTB45Q96K62 511 aaPredicted RBP10.8□□□□□ -0.68
CD48-202ENST00000368046 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 CDCA3Q99618 268 aaPredicted RBP10.8□□□□□ -0.68
CD48-202ENST00000368046 CCDC94Q9BW85 323 aaPredicted RBP10.8□□□□□ -0.68
CD48-202ENST00000368046 CDT1Q9H211 546 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 CUEDC2Q9H467 287 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 ST6GALNAC4Q9H4F1 302 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 ENTPD7Q9NQZ7 604 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 CLDND1Q9NY35 253 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 TBX20Q9UMR3 447 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 GDAQ9Y2T3 454 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 IRAK3Q9Y616 596 aa10.8□□□□□ -0.68
CD48-202ENST00000368046 FNDC1Q4ZHG4 1894 aaPredicted RBP10.8□□□□□ -0.68
CD48-202ENST00000368046 RALGAPA2Q2PPJ7 1873 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 FSD2A1L4K1 749 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 HIDE1A8MVS5 230 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 ABLIM1O14639 778 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 PER2O15055 1255 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 RECQL4O94761 1208 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 CTSAP10619 480 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 GAP43P17677 238 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 GTF2F1P35269 517 aaKnown RBP eCLIP10.79□□□□□ -0.68
CD48-202ENST00000368046 YARSP54577 528 aaKnown RBP10.79□□□□□ -0.68
CD48-202ENST00000368046 AMPD3Q01432 767 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 MCL1Q07820 350 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 TUSC3Q13454 348 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 SMC1AQ14683 1233 aaKnown RBP10.79□□□□□ -0.68
CD48-202ENST00000368046 E2F4Q16254 413 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms