RNA–Protein interactions for RNA: ENST00000367004.3

TRAF5-203, Transcript of TNF receptor associated factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF5, Length 1,827 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-203ENST00000367004 BCCIPQ9P287 314 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 CNOT8Q9UFF9 292 aaKnown RBP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 SNX24Q9Y343 169 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 CTDP1Q9Y5B0 961 aaPredicted RBP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 DOCK1Q14185 1865 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 PODXLO00592 558 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 PYGMP11217 842 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 CCND2P30279 289 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 PDE6CP51160 858 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 PMS2P54278 862 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 SIX1Q15475 284 aaPredicted RBP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 TTC31Q49AM3 519 aaPredicted RBP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 CIAPIN1Q6FI81 312 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 ACAD10Q6JQN1 1059 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 MICALCLQ6ZW33 695 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 OTUD6AQ7L8S5 288 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 VSIG10LQ86VR7 867 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 SLC13A5Q86YT5 568 aaPredicted RBP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 FBXL13Q8NEE6 735 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 CCDC127Q96BQ5 260 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 ZNF653Q96CK0 615 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 LRRC4CQ9HCJ2 640 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 CHORDC1Q9UHD1 332 aaPredicted RBP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 SCAF8Q9UPN6 1271 aaKnown RBP13.76□□□□□ -0.21
TRAF5-203ENST00000367004 PCDHA10Q9Y5I2 948 aa13.76□□□□□ -0.21
TRAF5-203ENST00000367004 KIAA1217Q5T5P2 1943 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 VWA5AO00534 786 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 ZNF862O60290 1169 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 GRIN3BO60391 1043 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 RPL21P46778 160 aaKnown RBP13.75□□□□□ -0.21
TRAF5-203ENST00000367004 PLTPP55058 493 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 IFFO1Q0D2I5 559 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 MTMR2Q13614 643 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 NSMFQ6X4W1 530 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 PACS2Q86VP3 889 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 HOOK3Q86VS8 718 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 CPNE8Q86YQ8 564 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 C12orf50Q8NA57 414 aaPredicted RBP13.75□□□□□ -0.21
TRAF5-203ENST00000367004 FBXO25Q8TCJ0 367 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 TAS1R2Q8TE23 839 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 BTBD6Q96KE9 485 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 POP1Q99575 1024 aaKnown RBP13.75□□□□□ -0.21
TRAF5-203ENST00000367004 PABPC3Q9H361 631 aaKnown RBP13.75□□□□□ -0.21
TRAF5-203ENST00000367004 PDLIM7Q9NR12 457 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 PARP2Q9UGN5 583 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 RLFQ13129 1914 aa13.75□□□□□ -0.21
TRAF5-203ENST00000367004 COL11A1P12107 1806 aaPredicted RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 GMNCA6NCL1 334 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 E7EVH7 732 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 MAFGO15525 162 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 MEFVO15553 781 aaPredicted RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 TRAPPC3O43617 180 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 DKC1O60832 514 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 GARTP22102 1010 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 COILP38432 576 aaPredicted RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 RTP1P59025 263 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 ZNF280AP59817 542 aaPredicted RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 MAGOHP61326 146 aaKnown RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 TNFAIP1Q13829 316 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 BAATQ14032 418 aaPredicted RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 CLEC16AQ2KHT3 1053 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 ODF2Q5BJF6 829 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 CCDC137Q6PK04 289 aaKnown RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 SV2AQ7L0J3 742 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 ENOSF1Q7L5Y1 443 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 TRMT1LQ7Z2T5 733 aaKnown RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 YTHDF3Q7Z739 585 aaKnown RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 USP37Q86T82 979 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 GPD1LQ8N335 351 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 PSPC1Q8WXF1 523 aaKnown RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 TATDN2Q93075 761 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 RNF25Q96BH1 459 aaPredicted RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 ATG4CQ96DT6 458 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 CEP170P1Q96L14 293 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 RNF146Q9NTX7 359 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 GABBR1Q9UBS5 961 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 MTUS1Q9ULD2 1270 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 TCRBV7S2A1N4TA0A589 114 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 DCDC2CA8MYV0 355 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 SPOPO43791 374 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 SHBGP04278 402 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 NR3C2P08235 984 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 KCNA2P16389 499 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 FNTAP49354 379 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 RWDD2BP57060 319 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 DENND2CQ68D51 928 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 REPS2Q8NFH8 660 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 POMGNT1Q8WZA1 660 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 DHX38Q92620 1227 aaKnown RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 ATP6V0A1Q93050 837 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 CNOT10Q9H9A5 744 aaKnown RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 PPANQ9NQ55 473 aaKnown RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 MTRF1LQ9UGC7 380 aaKnown RBP13.74□□□□□ -0.21
TRAF5-203ENST00000367004 RIPK3Q9Y572 518 aa13.74□□□□□ -0.21
TRAF5-203ENST00000367004 ADGRA3Q8IWK6 1321 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms