RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 MAD2L2Q9UI95 211 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 GINS2Q9Y248 185 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 PIGHQ14442 188 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 RAPH1Q70E73 1250 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 SLC40A1Q9NP59 571 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 ARMCX2Q7L311 632 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZBED8Q8IZ13 594 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 C2orf40Q9H1Z8 148 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 CRKP46108 304 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 MYBPC2Q14324 1141 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 SUGP1Q8IWZ8 645 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 LACRTQ9GZZ8 138 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 NYAP2Q9P242 653 aa12.51□□□□□ -0.41
CDC42BPA-202ENST00000366764 TMEM120BA0PK00 339 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 ADCY1Q08828 1119 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 TTC17Q96AE7 1141 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 SENP2Q9HC62 589 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 PCDHB2Q9Y5E7 798 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 PALM3A6NDB9 673 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 MARK3P27448 753 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 SKOR1P84550 965 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 JADE1Q6IE81 842 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 SENP7Q9BQF6 1050 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 LRRIQ3A6PVS8 624 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 F5H6K3 240 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 COPS2P61201 443 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 KLRC3Q07444 240 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 PDIA2Q13087 525 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 FGD4Q96M96 766 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 C11orf70Q9BRQ4 267 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 MEGF6O75095 1541 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 AP3B1O00203 1094 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 RARGP13631 454 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 ROR1Q01973 937 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 KCTD2Q14681 263 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 CDKL3Q8IVW4 592 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 ICA1LQ8NDH6 482 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 APBB2Q92870 758 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 PAMP19021 973 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 TAC1P20366 129 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 RASA1P20936 1047 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 ARSEP51690 589 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 CASKIN2Q8WXE0 1202 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 CAMTA2O94983 1202 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 GTF2H1P32780 548 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 POLE2P56282 527 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 CYB5D1Q6P9G0 228 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 C4orf22Q6V702 233 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 NSUN6Q8TEA1 469 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 RIN2Q8WYP3 895 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 TMBIM4Q9HC24 238 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 HSPBP1Q9NZL4 362 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 PIK3C2AO00443 1686 aa12.5□□□□□ -0.41
CDC42BPA-202ENST00000366764 STAT3P40763 770 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 CCNA1P78396 465 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 DAB2IPQ5VWQ8 1189 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 BBS5Q8N3I7 341 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 MREGQ8N565 214 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 CCDC124Q96CT7 223 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 MASTLQ96GX5 879 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 ZSWIM1Q9BR11 485 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 PHF20L1A8MW92 1017 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 H0Y3Z8 333 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 DGAT1O75907 488 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 RFC1P35251 1148 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 HERVK_113P62684 666 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 NUDCD3Q8IVD9 361 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 RIT2Q99578 217 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 MED10Q9BTT4 135 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 HSPA4LO95757 839 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 FAM47CQ5HY64 1035 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 DYDC2Q96IM9 177 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 OSBPL1AQ9BXW6 950 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 A0A087X0T9 212 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 FAM228BP0C875 321 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 MAPK6Q16659 721 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 TMEM8AQ9HCN3 771 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 WDR91A4D1P6 747 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 SNAP23O00161 211 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 HHIPL2Q6UWX4 724 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 RIMBP3CA6NJZ7 1639 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 RIMBP3BA6NNM3 1639 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 RIMBP3Q9UFD9 1639 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 GABPAQ06546 454 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 DUOXA2Q1HG44 320 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 CNOT7Q9UIV1 285 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 CAPN6Q9Y6Q1 641 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 SPOPLQ6IQ16 392 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 BARGINQ6ZT62 677 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 SP8Q8IXZ3 490 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 PRPF38AQ8NAV1 312 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 ALG6Q9Y672 507 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 FSBPO95073 299 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 ACADSP16219 412 aa12.49□□□□□ -0.41
CDC42BPA-202ENST00000366764 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms