RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 ZNF408Q9H9D4 720 aa2.11□□□□□ -2.07
MIR539-201ENST00000365690 UNKLQ9H9P5 680 aaKnown RBP2.11□□□□□ -2.07
MIR539-201ENST00000365690 ANLNQ9NQW6 1124 aa2.11□□□□□ -2.07
MIR539-201ENST00000365690 TBCCD1Q9NVR7 557 aa2.11□□□□□ -2.07
MIR539-201ENST00000365690 INPP5FQ9Y2H2 1132 aa2.11□□□□□ -2.07
MIR539-201ENST00000365690 TBC1D30Q9Y2I9 924 aa2.11□□□□□ -2.07
MIR539-201ENST00000365690 TNPO3Q9Y5L0 923 aaKnown RBP2.11□□□□□ -2.07
MIR539-201ENST00000365690 TRBV23-1A0A0A0MS06 115 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 A0A1W2PR48 441 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 WNT10BO00744 389 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 SEC24DO94855 1032 aaPredicted RBP2.1□□□□□ -2.07
MIR539-201ENST00000365690 NAT1P18440 290 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 MGAT1P26572 445 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 RBM25P49756 843 aaKnown RBP2.1□□□□□ -2.07
MIR539-201ENST00000365690 KIF11P52732 1056 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 MAPK10P53779 464 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 GABREP78334 506 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 DUSP2Q05923 314 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 ADCY2Q08462 1091 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 CYP2A13Q16696 494 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 SUPT20HL1Q3ZLR7 823 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 TMEM177Q53S58 311 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 ZNF628Q5EBL2 1059 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 MFSD14BQ5SR56 506 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 KIAA1161Q6NSJ0 714 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 SPATC1Q76KD6 591 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 GSTCDQ8NEC7 633 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 ST13P5Q8NFI4 369 aaPredicted RBP2.1□□□□□ -2.07
MIR539-201ENST00000365690 SLC35B2Q8TB61 432 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 RPGRQ92834 1020 aaKnown RBP2.1□□□□□ -2.07
MIR539-201ENST00000365690 RNF31Q96EP0 1072 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 HEPHQ9BQS7 1158 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 NOL10Q9BSC4 688 aaKnown RBP2.1□□□□□ -2.07
MIR539-201ENST00000365690 MYL10Q9BUA6 226 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 BOCQ9BWV1 1114 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 SPATA9Q9BWV2 254 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 SLC52A2Q9HAB3 445 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 ATP11BQ9Y2G3 1177 aa2.1□□□□□ -2.07
MIR539-201ENST00000365690 B5MCH6 92 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 KRT37O76014 449 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 PRPF6O94906 941 aaKnown RBP2.09□□□□□ -2.07
MIR539-201ENST00000365690 SSBP05455 408 aaKnown RBP eCLIP2.09□□□□□ -2.07
MIR539-201ENST00000365690 CLEC2LP0C7M8 214 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 SUMO1P63165 101 aaKnown RBP2.09□□□□□ -2.07
MIR539-201ENST00000365690 SLC10A2Q12908 348 aaPredicted RBP2.09□□□□□ -2.07
MIR539-201ENST00000365690 GRM1Q13255 1194 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 EPHA7Q15375 998 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 TSTD2Q5T7W7 516 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 TSHZ3Q63HK5 1081 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 ESRP1Q6NXG1 681 aaKnown RBP2.09□□□□□ -2.07
MIR539-201ENST00000365690 YTHDF3Q7Z739 585 aaKnown RBP2.09□□□□□ -2.07
MIR539-201ENST00000365690 PEG10Q86TG7 708 aaKnown RBP2.09□□□□□ -2.07
MIR539-201ENST00000365690 LRRC47Q8N1G4 583 aaKnown RBP2.09□□□□□ -2.07
MIR539-201ENST00000365690 C2orf69Q8N8R5 385 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 IGSF22Q8N9C0 903 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 MARK4Q96L34 752 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 QTRT1Q9BXR0 403 aaKnown RBP2.09□□□□□ -2.07
MIR539-201ENST00000365690 BCL11AQ9H165 835 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 GALNT9Q9HCQ5 603 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 SYNPO2Q9UMS6 1093 aa2.09□□□□□ -2.07
MIR539-201ENST00000365690 PNPLA7Q6ZV29 1317 aa2.09□□□□□ -2.08
MIR539-201ENST00000365690 A0A1B0GTW7 788 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 KLF4O43474 513 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 DIAPH1O60610 1272 aaKnown RBP2.08□□□□□ -2.08
MIR539-201ENST00000365690 FGFR4P22455 802 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 VAMP1P23763 118 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 EPHB2P29323 1055 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 MPGP29372 298 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 SREBF1P36956 1147 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 FOLR3P41439 243 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 MXRA7P84157 204 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 LAMB3Q13751 1172 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 UBE3CQ15386 1083 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 SPDYE7PQ495Y7 208 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 KIAA1841Q6NSI8 718 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 SSH3Q8TE77 659 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 DENND1AQ8TEH3 1009 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 PTCD3Q96EY7 689 aaKnown RBP2.08□□□□□ -2.08
MIR539-201ENST00000365690 PHACTR3Q96KR7 559 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 SH2D3AQ9BRG2 576 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 TGIF2Q9GZN2 237 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 VPS33BQ9H267 617 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 PODXL2Q9NZ53 605 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 SERGEFQ9UGK8 458 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 ZNF112Q9UJU3 913 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 NOX1Q9Y5S8 564 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 WNT6Q9Y6F9 365 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 AATKQ6ZMQ8 1374 aa2.08□□□□□ -2.08
MIR539-201ENST00000365690 ELL2O00472 640 aaPredicted RBP2.07□□□□□ -2.08
MIR539-201ENST00000365690 KRT86O43790 486 aa2.07□□□□□ -2.08
MIR539-201ENST00000365690 PRSS23O95084 383 aa2.07□□□□□ -2.08
MIR539-201ENST00000365690 GAS8-AS1O95177 125 aa2.07□□□□□ -2.08
MIR539-201ENST00000365690 FGRP09769 529 aa2.07□□□□□ -2.08
MIR539-201ENST00000365690 MT3P25713 68 aa2.07□□□□□ -2.08
MIR539-201ENST00000365690 VAV2P52735 878 aa2.07□□□□□ -2.08
MIR539-201ENST00000365690 NANOS2P60321 138 aaKnown RBP2.07□□□□□ -2.08
MIR539-201ENST00000365690 KRT81Q14533 505 aa2.07□□□□□ -2.08
MIR539-201ENST00000365690 TMEM119Q4V9L6 283 aa2.07□□□□□ -2.08
MIR539-201ENST00000365690 SLC2A7Q6PXP3 512 aa2.07□□□□□ -2.08
MIR539-201ENST00000365690 KRT73Q86Y46 540 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms