RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 NRIP3Q9NQ35 241 aa2.31□□□□□ -2.04
RNU4-11P-201ENST00000365287 KLHL11Q9NVR0 708 aa2.31□□□□□ -2.04
RNU4-11P-201ENST00000365287 MTMR4Q9NYA4 1195 aa2.31□□□□□ -2.04
RNU4-11P-201ENST00000365287 ZNF112Q9UJU3 913 aa2.31□□□□□ -2.04
RNU4-11P-201ENST00000365287 WNT6Q9Y6F9 365 aa2.31□□□□□ -2.04
RNU4-11P-201ENST00000365287 CCDC187A0A096LP49 1063 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 DVL2O14641 736 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 KLF4O43474 513 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 KRT37O76014 449 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 SEC24DO94855 1032 aaPredicted RBP2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 ELANEP08246 267 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 CCKARP32238 428 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 MECP2P51608 486 aaKnown RBP2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 CHN2P52757 468 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 CXADRP78310 365 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 EXOSC10Q01780 885 aaKnown RBP2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 LAMB3Q13751 1172 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 TRIM61Q5EBN2 209 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 ANKS6Q68DC2 871 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 LNX2Q8N448 690 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 MSL3Q8N5Y2 521 aaKnown RBP2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 IGSF22Q8N9C0 903 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 ADAMTS15Q8TE58 950 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 DENND1AQ8TEH3 1009 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 ARMC5Q96C12 935 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 EXOC2Q96KP1 924 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 BHMT2Q9H2M3 363 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 ANLNQ9NQW6 1124 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 NDOR1Q9UHB4 597 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 KCNE5Q9UJ90 142 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 MRPS23Q9Y3D9 190 aaKnown RBP2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 PCDHB6Q9Y5E3 794 aa2.3□□□□□ -2.04
RNU4-11P-201ENST00000365287 AOX1Q06278 1338 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 A0A1B0GTW7 788 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 SERINC4A6NH21 518 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 KRT86O43790 486 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 PEX1O43933 1283 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 NRP2O60462 931 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 PRPF6O94906 941 aaKnown RBP2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 APOL3O95236 402 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 GNL2Q13823 731 aaKnown RBP2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 KRT81Q14533 505 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 LONRF2Q1L5Z9 754 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 CCDC178Q5BJE1 867 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 KIAA1958Q8N8K9 716 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 CDYL2Q8N8U2 506 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 ZBTB8BQ8NAP8 495 aaPredicted RBP2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 PTCD3Q96EY7 689 aaKnown RBP2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 DHRS4Q9BTZ2 278 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 MYL10Q9BUA6 226 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 REXO4Q9GZR2 422 aaKnown RBP2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 RNPEPQ9H4A4 650 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 PODXL2Q9NZ53 605 aa2.29□□□□□ -2.04
RNU4-11P-201ENST00000365287 ZMYM3Q14202 1370 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 IGKV2D-30A0A075B6S6 120 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 A0A1W2PR48 441 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 TCRBV16S1A1N1A0A5B0 115 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 DRGXA6NNA5 263 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 H7C1D1 291 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 PJA2O43164 708 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 KCNA6P17658 529 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 FOLR3P41439 243 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 GPR15P49685 360 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 VAV2P52735 878 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 NRG3P56975 720 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 SSRP1Q08945 709 aaKnown RBP2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 GRM1Q13255 1194 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 ZNF174Q15697 407 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 ZC3H12BQ5HYM0 836 aaKnown RBP2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 ATXN7L2Q5T6C5 722 aaPredicted RBP2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 TSTD2Q5T7W7 516 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 KIAA0895LQ68EN5 471 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 KIAA1161Q6NSJ0 714 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 ABHD17CQ6PCB6 329 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 PDZD4Q76G19 769 aaPredicted RBP2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 SPATC1Q76KD6 591 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 NEK8Q86SG6 692 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 CHST14Q8NCH0 376 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 HMCESQ96FZ2 354 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 SCLYQ96I15 445 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 FUBP3Q96I24 572 aaKnown RBP eCLIP2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 PPP1R10Q96QC0 940 aaKnown RBP2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 POFUT1Q9H488 388 aa2.28□□□□□ -2.04
RNU4-11P-201ENST00000365287 MYPNQ86TC9 1320 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 FAM221BA6H8Z2 402 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 PPEF2O14830 753 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 KCNQ2O43526 872 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 PCDH8O95206 1070 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 XPAP23025 273 aaPredicted RBP2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 MT3P25713 68 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 PTX3P26022 381 aaPredicted RBP2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 CERS1P27544 350 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 MEF2AQ02078 507 aaPredicted RBP2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 RAB33AQ14088 237 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 NBPF8Q3BBV2 869 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 TSHZ3Q63HK5 1081 aa2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 ESRP1Q6NXG1 681 aaKnown RBP2.27□□□□□ -2.05
RNU4-11P-201ENST00000365287 LMBR1LQ6UX01 489 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms