RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CRHR1P34998 444 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 SREBF1P36956 1147 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 ACVRL1P37023 503 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 SLC5A3P53794 718 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 KLF10Q13118 480 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 PCBP2Q15366 365 aaKnown RBP eCLIP6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 SYDE2Q5VT97 1194 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 DOK3Q7L591 496 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 OR7D4Q8NG98 312 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 NRG4Q8WWG1 115 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 JADE3Q92613 823 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 HOXB13Q92826 284 aaPredicted RBP6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 PAWRQ96IZ0 340 aaKnown RBP6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 PHACTR3Q96KR7 559 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 MENTQ9BUN1 341 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 TEX101Q9BY14 249 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 POGKQ9P215 609 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 EIF2B4Q9UI10 523 aaKnown RBP6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 INTUQ9ULD6 942 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 SIK3Q9Y2K2 1263 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 AHRRA9YTQ3 701 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 GABRDO14764 452 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 SLPIP03973 132 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 FPR1P21462 350 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 GDF5P43026 501 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 SLC6A9P48067 706 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 FAM189BP81408 668 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 ANO4Q32M45 955 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 DCAF17Q5H9S7 520 aaPredicted RBP6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 NAIF1Q69YI7 327 aaPredicted RBP6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 PDZD4Q76G19 769 aaPredicted RBP6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 CCHCR1Q8TD31 782 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 RAB24Q969Q5 203 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 CLIP3Q96DZ5 547 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 PDCD2LQ9BRP1 358 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 NDC1Q9BTX1 674 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 BCO1Q9HAY6 547 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 ZNF277Q9NRM2 450 aaPredicted RBP6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 GPRC5BQ9NZH0 403 aa6.15□□□□□ -1.42
RNU4-28P-201ENST00000364739 PNPLA7Q6ZV29 1317 aa6.15□□□□□ -1.43
RNU4-28P-201ENST00000364739 WASHC2CQ9Y4E1 1318 aa6.15□□□□□ -1.43
RNU4-28P-201ENST00000364739 ATRNL1Q5VV63 1379 aa6.15□□□□□ -1.43
RNU4-28P-201ENST00000364739 TRIM75PA6NK02 468 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 CXorf49A8MYA2 514 aaPredicted RBP6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 XPOTO43592 962 aaKnown RBP6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 RNASE9P60153 205 aaKnown RBP6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 RAP2BP61225 183 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 NHLH2Q02577 135 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 BMT2Q1RMZ1 405 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 FAM47AQ5JRC9 791 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 AFMIDQ63HM1 303 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 EFCAB12Q6NXP0 572 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 ZNF276Q8N554 614 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 OR10H5Q8NGA6 315 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 TFAP2CQ92754 450 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 FUBP3Q96I24 572 aaKnown RBP eCLIP6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 GPATCH3Q96I76 525 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 MYOCQ99972 504 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 TUBD1Q9UJT1 453 aa6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 AJAP1Q9UKB5 411 aaPredicted RBP6.14□□□□□ -1.43
RNU4-28P-201ENST00000364739 ZNF185O15231 689 aa6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 RAP2AP10114 183 aa6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 ALOX15P16050 662 aaPredicted RBP6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 C5AR1P21730 350 aa6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 ZFP36P26651 326 aaKnown RBP6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 FAM180AQ6UWF9 173 aa6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 ZNF572Q7Z3I7 529 aaPredicted RBP6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 SLC25A43Q8WUT9 341 aaPredicted RBP6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 NEU4Q8WWR8 484 aaPredicted RBP6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 FAM193BQ96PV7 902 aaPredicted RBP6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 SMAD5Q99717 465 aaKnown RBP6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 SENP6Q9GZR1 1112 aaPredicted RBP6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 NRDE2Q9H7Z3 1164 aa6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 TRPM5Q9NZQ8 1165 aa6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 RUVBL1Q9Y265 456 aaKnown RBP6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 ACTL7AQ9Y615 435 aa6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 TNKSO95271 1327 aa6.13□□□□□ -1.43
RNU4-28P-201ENST00000364739 LOC105371045A0A1W2PR82 267 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 KLHL33A6NCF5 533 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 B5MCH6 92 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 FZD9O00144 591 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 NDUFS2O75306 463 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 PCSK1P29120 753 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 ALDH1A3P47895 512 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 FLT3LGP49771 235 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 ODF1Q14990 250 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 PTPN21Q16825 1174 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 FAM177A1Q8N128 213 aaPredicted RBP6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 ZGPATQ8N5A5 531 aaKnown RBP6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 ZNF483Q8TF39 744 aaPredicted RBP6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 LARP4BQ92615 738 aaKnown RBP6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 MRI1Q9BV20 369 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 PCDHA13Q9Y5I0 950 aa6.12□□□□□ -1.43
RNU4-28P-201ENST00000364739 ANKRD62A6NC57 917 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 DRGXA6NNA5 263 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 OVOL3O00110 214 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 AMY1AP04745 511 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 RBP3P10745 1247 aa6.11□□□□□ -1.43
RNU4-28P-201ENST00000364739 CHN2P52757 468 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms