RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 ZBTB21Q9ULJ3 1066 aa2.62□□□□□ -1.99
RNU6-1048P-201ENST00000364054 USP15Q9Y4E8 981 aaPredicted RBP2.62□□□□□ -1.99
RNU6-1048P-201ENST00000364054 RPTORQ8N122 1335 aa2.62□□□□□ -1.99
RNU6-1048P-201ENST00000364054 UNC119BA6NIH7 251 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PROB1E7EW31 1015 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ELL2O00472 640 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 TEX33O43247 280 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 KPNA6O60684 536 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SPDEFO95238 335 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 IL2RBP14784 551 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CTGFP29279 349 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CLK3P49761 638 aaKnown RBP2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CACNA2D1P54289 1103 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 IL2P60568 153 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 FAM189BP81408 668 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MRPS35P82673 323 aaKnown RBP2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 DSG1Q02413 1049 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ATP2B3Q16720 1220 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 FAM47AQ5JRC9 791 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 FAM102AQ5T9C2 384 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 AGAP9Q5VTM2 703 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CREB3L3Q68CJ9 461 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 GRASPQ7Z6J2 395 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 LRRTM3Q86VH5 581 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SYT12Q8IV01 421 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CHTF18Q8WVB6 975 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 BOD1Q96IK1 185 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ZNF496Q96IT1 587 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ACAP3Q96P50 834 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CASS4Q9NQ75 786 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PLAAQ9Y263 795 aa2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 NOC2LQ9Y3T9 749 aaKnown RBP2.61□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PRSS38A1L453 326 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MYADML2A6NDP7 307 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MARCH11A6NNE9 402 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 KDM1AO60341 852 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ALAS1P13196 640 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MTHFD2P13995 350 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ITGB6P18564 788 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SDSP20132 328 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ZFP36P26651 326 aaKnown RBP2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PTPN7P35236 360 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PLA2G5P39877 138 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 RARRES1P49788 294 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SOX10P56693 466 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 KRTAP10-11P60412 298 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 FOXI1Q12951 378 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SP140Q13342 867 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 TP53BP2Q13625 1128 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 BMS1Q14692 1282 aaKnown RBP2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ZNF169Q14929 603 aaPredicted RBP2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 TERF2Q15554 542 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ZBTB41Q5SVQ8 909 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 Q6ZNX1 250 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 C16orf86Q6ZW13 317 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PTF1AQ7RTS3 328 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 RASSF3Q86WH2 238 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MAPKAPK5Q8IW41 473 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 TMEM132CQ8N3T6 1108 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SLC44A3Q8N4M1 653 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MSL3Q8N5Y2 521 aaKnown RBP2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SMC1BQ8NDV3 1235 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MDM1Q8TC05 714 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SH3TC2Q8TF17 1288 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 NTN5Q8WTR8 489 aaPredicted RBP2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 APPBP2Q92624 585 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 NINJ1Q92982 152 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 FUBP3Q96I24 572 aaKnown RBP eCLIP2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 FDXACB1Q9BRP7 624 aaPredicted RBP2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 LRFN3Q9BTN0 628 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ALOXE3Q9BYJ1 711 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ANO3Q9BYT9 981 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SLC29A3Q9BZD2 475 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MTFR1LQ9H019 292 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 TMEM74BQ9NUR3 256 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 FAM30AQ9NZY2 134 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 KCNE5Q9UJ90 142 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CDY2AQ9Y6F7 541 aa2.6□□□□□ -1.99
RNU6-1048P-201ENST00000364054 DRGXA6NNA5 263 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 KRTAP29-1A8MX34 341 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PPP1R12AO14974 1030 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ULK1O75385 1050 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CFBP00751 764 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 POMCP01189 267 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 IGLV2-14P01704 120 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CTSSP25774 331 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 ECHS1P30084 290 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MPLP40238 635 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 MANFP55145 182 aaKnown RBP2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PER3P56645 1201 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 FAPQ12884 760 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SQSTM1Q13501 440 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 UGT8Q16880 541 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PITRM1Q5JRX3 1037 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 PAPD7Q5XG87 772 aaKnown RBP2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 TSHZ3Q63HK5 1081 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 CNNM4Q6P4Q7 775 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 NXPE1Q8N323 547 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 OR56A1Q8NGH5 318 aa2.59□□□□□ -1.99
RNU6-1048P-201ENST00000364054 SREK1Q8WXA9 508 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms