RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SGSM3Q96HU1 749 aa11.37□□□□□ -0.59
SMC3-201ENST00000361804 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 GJB6O95452 261 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 GAP43P17677 238 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 SCP2P22307 547 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 VAMP7P51809 220 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 ELF3P78545 371 aaPredicted RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 PLA2G4FQ68DD2 849 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 TMEM179Q6ZVK1 233 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 CYP4X1Q8N118 509 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 ZNF653Q96CK0 615 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 AAASQ9NRG9 546 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 TCP11X1B4DZS4 312 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 EIF3DO15371 548 aaKnown RBP eCLIP11.36□□□□□ -0.599e-6■□□□□ 11.1
SMC3-201ENST00000361804 PIAS1O75925 651 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 UBOX5O94941 541 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 CETPP11597 493 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 ITGB5P18084 799 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 GSCP56915 257 aaPredicted RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 SIX1Q15475 284 aaPredicted RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 HOOK3Q86VS8 718 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 ZNF564Q8TBZ8 553 aaPredicted RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 N4BP2L2Q92802 583 aaPredicted RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 MRRFQ96E11 262 aaKnown RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 AGBL1Q96MI9 1066 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 TMEM117Q9H0C3 514 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 CDC42EP4Q9H3Q1 356 aaKnown RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 KCNK9Q9NPC2 374 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 KLHL11Q9NVR0 708 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 TTC7AQ9ULT0 858 aaPredicted RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 R3HDM2Q9Y2K5 976 aaKnown RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 IPO5O00410 1097 aaKnown RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 RASGRF2O14827 1237 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 C21orf2O43822 256 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 VIL1P09327 827 aaKnown RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 COILP38432 576 aaPredicted RBP11.36□□□□□ -0.59
SMC3-201ENST00000361804 GPC5P78333 572 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 KYNUQ16719 465 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 UGCGQ16739 394 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 CAPN12Q6ZSI9 719 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
SMC3-201ENST00000361804 PPIP5K2O43314 1243 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 NUDT17P0C025 328 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 STAT2P52630 851 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 MTM1Q13496 603 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 CEP55Q53EZ4 464 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 DYDC1Q8WWB3 177 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 STAMBPL1Q96FJ0 436 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 WNK4Q96J92 1243 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 FOSP01100 380 aaPredicted RBP11.35□□□□□ -0.59
SMC3-201ENST00000361804 PEX3P56589 373 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 FMO1Q01740 532 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 CNGA2Q16280 664 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
SMC3-201ENST00000361804 RNF207Q6ZRF8 634 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 SLC13A5Q86YT5 568 aaPredicted RBP11.35□□□□□ -0.59
SMC3-201ENST00000361804 GLT8D2Q9H1C3 349 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 HSPBP1Q9NZL4 362 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 CFHP08603 1231 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 SEL1L2Q5TEA6 688 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 SCARA3Q6AZY7 606 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 UBL4BQ8N7F7 174 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 SLC5A5Q92911 643 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 YY1AP1Q9H869 796 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 GEMIN8Q9NWZ8 242 aaKnown RBP11.35□□□□□ -0.59
SMC3-201ENST00000361804 ASIC3Q9UHC3 531 aa11.35□□□□□ -0.59
SMC3-201ENST00000361804 NOCTQ9UK39 431 aaKnown RBP11.35□□□□□ -0.59
SMC3-201ENST00000361804 TMEM120BA0PK00 339 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 CTNNA2P26232 953 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 ZNF131P52739 623 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 KRT17Q04695 432 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 CPXCR1Q8N123 301 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 ODF2LQ9ULJ1 636 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 STK38LQ9Y2H1 464 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 CCDC169A6NNP5 214 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 NFIBO00712 420 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 SKAP2O75563 359 aaPredicted RBP11.34□□□□□ -0.59
SMC3-201ENST00000361804 CLSTN1O94985 981 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 POLR2MP0CAP2 368 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 DHX34Q14147 1143 aaKnown RBP11.34□□□□□ -0.59
SMC3-201ENST00000361804 CPA5Q8WXQ8 436 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 NACC1Q96RE7 527 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 TMEM39BQ9GZU3 492 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 ACTR5Q9H9F9 607 aaPredicted RBP11.34□□□□□ -0.59
SMC3-201ENST00000361804 NOD2Q9HC29 1040 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 TUFT1Q9NNX1 390 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 ATP6V1G2O95670 118 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 EIF3BP55884 814 aaKnown RBP11.34□□□□□ -0.59
SMC3-201ENST00000361804 PPP2R5CQ13362 524 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 NUGGCQ68CJ6 796 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 ANKS1BQ7Z6G8 1248 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 PASD1Q8IV76 773 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 TAS1R2Q8TE23 839 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 ARHGEF2Q92974 986 aaKnown RBP11.34□□□□□ -0.59
SMC3-201ENST00000361804 C9orf72Q96LT7 481 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 RASAL2Q9UJF2 1139 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 ZHX2Q9Y6X8 837 aa11.34□□□□□ -0.59
SMC3-201ENST00000361804 SYNGAP1Q96PV0 1343 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms