RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 C10orf71Q711Q0 1435 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 SPATA31A6Q5VVP1 1343 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 CYP26A1O43174 497 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 PSMD10O75832 226 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 CCND1P24385 295 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 CRY2Q49AN0 593 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 PRUNE1Q86TP1 453 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 ECHDC2Q86YB7 292 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 SYCP3Q8IZU3 236 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 C12orf50Q8NA57 414 aaPredicted RBP11.66□□□□□ -0.54
RPE-202ENST00000359429 CBWD1Q9BRT8 395 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 STRA6Q9BX79 667 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 DDTLA6NHG4 134 aaPredicted RBP11.65□□□□□ -0.54
RPE-202ENST00000359429 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
RPE-202ENST00000359429 MTA2O94776 668 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 TTC4O95801 387 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 FOSP01100 380 aaPredicted RBP11.65□□□□□ -0.54
RPE-202ENST00000359429 CALCAP01258 141 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 HLA-DOAP06340 250 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 FOXN2P32314 431 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 CCNHP51946 323 aaPredicted RBP11.65□□□□□ -0.54
RPE-202ENST00000359429 FMO1Q01740 532 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 IKQ13123 557 aaPredicted RBP11.65□□□□□ -0.54
RPE-202ENST00000359429 EPC2Q52LR7 807 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 TMEM63BQ5T3F8 832 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 LRCH2Q5VUJ6 765 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 KCNV2Q8TDN2 545 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 KREMEN1Q96MU8 473 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 TRIM7Q9C029 511 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 TUFT1Q9NNX1 390 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 ASIC3Q9UHC3 531 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 FOCADQ5VW36 1801 aa11.65□□□□□ -0.54
RPE-202ENST00000359429 EIF4E1BA6NMX2 242 aaKnown RBP11.65□□□□□ -0.55
RPE-202ENST00000359429 CYP3A4P08684 503 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 VPS41P49754 854 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 ITGA8P53708 1063 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 RWDD2BP57060 319 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 JAG1P78504 1218 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 SGO2Q562F6 1265 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 TRAPPC3LQ5T215 181 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 NAIF1Q69YI7 327 aaPredicted RBP11.65□□□□□ -0.55
RPE-202ENST00000359429 KIAA0825Q8IV33 1275 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 WHRNQ9P202 907 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 NYAP2Q9P242 653 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 NKX1-2Q9UD57 310 aaPredicted RBP11.65□□□□□ -0.55
RPE-202ENST00000359429 STK24Q9Y6E0 443 aa11.65□□□□□ -0.55
RPE-202ENST00000359429 GOLGB1Q14789 3259 aaKnown RBP11.65□□□□□ -0.55
RPE-202ENST00000359429 NRAPQ86VF7 1730 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 O00370 1275 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 HIP1RO75146 1068 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 GDF11O95390 407 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 NDUFB10O96000 172 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 PDE6BP35913 854 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 ABL2P42684 1182 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 VAMP7P51809 220 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 RNASELQ05823 741 aaKnown RBP11.64□□□□□ -0.55
RPE-202ENST00000359429 CERKLQ49MI3 558 aaPredicted RBP11.64□□□□□ -0.55
RPE-202ENST00000359429 ANKRD20A2Q5SQ80 823 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 ANKRD20A1Q5TYW2 823 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 ANKRD20A3Q5VUR7 823 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 FAM47EQ6ZV65 393 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 SLC9A9Q8IVB4 645 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 SRRM1Q8IYB3 904 aaKnown RBP11.64□□□□□ -0.55
RPE-202ENST00000359429 GBP7Q8N8V2 638 aaPredicted RBP11.64□□□□□ -0.55
RPE-202ENST00000359429 SLC17A8Q8NDX2 589 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 C7orf43Q8WVR3 580 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 ZNF653Q96CK0 615 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 SPDL1Q96EA4 605 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 CCDC17Q96LX7 622 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 FAM118BQ9BPY3 351 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 NAALADL1Q9UQQ1 740 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 ZNF831Q5JPB2 1677 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 FSCN2O14926 492 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 UPP2O95045 317 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 CYP1A2P05177 515 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 CCNB1P14635 433 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 TAC1P20366 129 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 RFX1P22670 979 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 STX2P32856 288 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 DOK7Q18PE1 504 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 DAB2IPQ5VWQ8 1189 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 SH3BP5LQ7L8J4 393 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 FMNL3Q8IVF7 1028 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 FAM71AQ8IYT1 594 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 CNKSR1Q969H4 720 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 SEL1LQ9UBV2 794 aa11.64□□□□□ -0.55
RPE-202ENST00000359429 R3HDM2Q9Y2K5 976 aaKnown RBP11.64□□□□□ -0.55
RPE-202ENST00000359429 GREB1LQ9C091 1923 aaPredicted RBP11.63□□□□□ -0.55
RPE-202ENST00000359429 THAP12O43422 761 aa11.63□□□□□ -0.55
RPE-202ENST00000359429 GZMAP12544 262 aa11.63□□□□□ -0.55
RPE-202ENST00000359429 WDR4P57081 412 aaKnown RBP11.63□□□□□ -0.55
RPE-202ENST00000359429 ICA1Q05084 483 aa11.63□□□□□ -0.55
RPE-202ENST00000359429 PPP2R5CQ13362 524 aa11.63□□□□□ -0.55
RPE-202ENST00000359429 RASA3Q14644 834 aa11.63□□□□□ -0.55
RPE-202ENST00000359429 MTFR1Q15390 333 aa11.63□□□□□ -0.55
RPE-202ENST00000359429 TBC1D10BQ4KMP7 808 aaPredicted RBP11.63□□□□□ -0.55
RPE-202ENST00000359429 RBM26Q5T8P6 1007 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms