RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ECM29Q5VYK3 1845 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 VWA5AO00534 786 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 DESP17661 470 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 PMS2P54278 862 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 SV2AQ7L0J3 742 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 TATDN2Q93075 761 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 DCPSQ96C86 337 aaKnown RBP11.98□□□□□ -0.49
SSU72-202ENST00000359060 HAUS1Q96CS2 278 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 TIPINQ9BVW5 301 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 SYNPO2Q9UMS6 1093 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 CHRNA3P32297 505 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 MMP14P50281 582 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 TAOK1Q7L7X3 1001 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 PALB2Q86YC2 1186 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 SCYL3Q8IZE3 742 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 CACNA2D3Q8IZS8 1091 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 C18orf8Q96DM3 657 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 WNT8AQ9H1J5 351 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 INTS9Q9NV88 658 aaKnown RBP11.97□□□□□ -0.49
SSU72-202ENST00000359060 PODXLO00592 558 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 EIF3HO15372 352 aaKnown RBP eCLIP11.97□□□□□ -0.49
SSU72-202ENST00000359060 P4HA2O15460 535 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 FGFR4P22455 802 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 GNA15P30679 374 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 MRPS9P82933 396 aaKnown RBP11.97□□□□□ -0.49
SSU72-202ENST00000359060 EMC2Q15006 297 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 CAVIN3Q969G5 261 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 ERP44Q9BS26 406 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 NKIRAS1Q9NYS0 192 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 DBR1Q9UK59 544 aaKnown RBP11.97□□□□□ -0.49
SSU72-202ENST00000359060 A0A0A6YYK5 440 aaPredicted RBP11.97□□□□□ -0.49
SSU72-202ENST00000359060 RASGRF2O14827 1237 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 HLA-DRAP01903 254 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 TNNC2P02585 160 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 DYNLT1P63172 113 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 KCTD2Q14681 263 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 UAP1Q16222 522 aaPredicted RBP11.97□□□□□ -0.49
SSU72-202ENST00000359060 SLFN12LQ6IEE8 588 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 ADRB2P07550 413 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 CYP11B1P15538 503 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 GKAP1Q5VSY0 366 aaPredicted RBP11.97□□□□□ -0.49
SSU72-202ENST00000359060 ZSWIM2Q8NEG5 633 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 GRK7Q8WTQ7 553 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 KRT35Q92764 455 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 TRIM11Q96F44 468 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 VPS37BQ9H9H4 285 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 MRPL47Q9HD33 250 aaKnown RBP11.97□□□□□ -0.49
SSU72-202ENST00000359060 CYP26B1Q9NR63 512 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 KLHL11Q9NVR0 708 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 ANAPC5Q9UJX4 755 aa11.97□□□□□ -0.49
SSU72-202ENST00000359060 ATRNL1Q5VV63 1379 aa11.96□□□□□ -0.49
SSU72-202ENST00000359060 LTBP4Q8N2S1 1624 aa11.96□□□□□ -0.49
SSU72-202ENST00000359060 ASTN2O75129 1339 aaPredicted RBP11.96□□□□□ -0.49
SSU72-202ENST00000359060 PPP1R37O75864 691 aa11.96□□□□□ -0.49
SSU72-202ENST00000359060 SPOPLQ6IQ16 392 aa11.96□□□□□ -0.49
SSU72-202ENST00000359060 DNAJC24Q6P3W2 148 aa11.96□□□□□ -0.49
SSU72-202ENST00000359060 KIAA1586Q9HCI6 787 aa11.96□□□□□ -0.49
SSU72-202ENST00000359060 GDF3Q9NR23 364 aa11.96□□□□□ -0.49
SSU72-202ENST00000359060 UBIAD1Q9Y5Z9 338 aa11.96□□□□□ -0.49
SSU72-202ENST00000359060 FAM187AA6NFU0 413 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 CCDC38Q502W7 563 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 NOP9Q86U38 636 aaKnown RBP11.96□□□□□ -0.5
SSU72-202ENST00000359060 CDR2LQ86X02 465 aaPredicted RBP11.96□□□□□ -0.5
SSU72-202ENST00000359060 APOBEC3FQ8IUX4 373 aaKnown RBP11.96□□□□□ -0.5
SSU72-202ENST00000359060 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.96□□□□□ -0.5
SSU72-202ENST00000359060 PARD3BQ8TEW8 1205 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 GPRASP2Q96D09 838 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 SIX2Q9NPC8 291 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 RIPK3Q9Y572 518 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 IGSF9BQ9UPX0 1349 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 LRRD1A4D1F6 860 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 PI4K2BG5E9Z4 385 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.5
SSU72-202ENST00000359060 KRT15P19012 456 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 LSP1P33241 339 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 PTGER2P43116 358 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 EIF3BP55884 814 aaKnown RBP11.96□□□□□ -0.5
SSU72-202ENST00000359060 DHX34Q14147 1143 aaKnown RBP11.96□□□□□ -0.5
SSU72-202ENST00000359060 FBXO25Q8TCJ0 367 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 RUNDC3BQ96NL0 473 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.5
SSU72-202ENST00000359060 TLR3O15455 904 aaKnown RBP11.95□□□□□ -0.5
SSU72-202ENST00000359060 TBC1D12O60347 775 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 PHF2O75151 1096 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 GGPS1O95749 300 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 KRT1P04264 644 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 GBP1P32455 592 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 STAT5BP51692 787 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 PPP2R2AP63151 447 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 CROCCP2Q86T23 111 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 DAW1Q8N136 415 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 IKBKGQ9Y6K9 419 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 LDHAP00338 332 aaKnown RBP11.95□□□□□ -0.5
SSU72-202ENST00000359060 EGFRP00533 1210 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 MDH1P40925 334 aaKnown RBP11.95□□□□□ -0.5
SSU72-202ENST00000359060 MARCKSL1P49006 195 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 HSD17B4P51659 736 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 MYBPC2Q14324 1141 aa11.95□□□□□ -0.5
SSU72-202ENST00000359060 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms