RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 CDR2LQ86X02 465 aaPredicted RBP11.12□□□□□ -0.63
FXR1-202ENST00000357559 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 DNMBPQ6XZF7 1577 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 DUOX2Q9NRD8 1548 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 KLHL38Q2WGJ6 581 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 TEDDM1Q5T9Z0 273 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 STMN3Q9NZ72 180 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 MYO1CO00159 1063 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 PRRG1O14668 218 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 TPI1P60174 286 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 VEPH1Q14D04 833 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 ARMC6Q6NXE6 501 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 C16orf62Q7Z3J2 963 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 TBC1D19Q8N5T2 526 aa11.12□□□□□ -0.63
FXR1-202ENST00000357559 TOPORSQ9NS56 1045 aaPredicted RBP11.12□□□□□ -0.63
FXR1-202ENST00000357559 ZNF197O14709 1029 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 RGS7P49802 495 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 GPC5P78333 572 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 LRRC8BQ6P9F7 803 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 RAPGEF6Q8TEU7 1601 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 PARNO95453 639 aaKnown RBP11.11□□□□□ -0.63
FXR1-202ENST00000357559 ALDH1A1P00352 501 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 AVPR1AP37288 418 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 SLC44A4Q53GD3 710 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 CENPPQ6IPU0 288 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 RCSD1Q6JBY9 416 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 TRIM48Q8IWZ4 208 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 ETNK1Q9HBU6 452 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 N6AMT1Q9Y5N5 214 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 TCP11X1B4DZS4 312 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 ARID5BQ14865 1188 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 KRT39Q6A163 491 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 SH3GL2Q99962 352 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 LSG1Q9H089 658 aaKnown RBP11.11□□□□□ -0.63
FXR1-202ENST00000357559 LOC102724428A0A0B4J2F2 783 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 TADA2AO75478 443 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 GRAP2O75791 330 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 ATP12AP54707 1039 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 SIK1P57059 783 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 FHDC1Q9C0D6 1143 aaPredicted RBP11.11□□□□□ -0.63
FXR1-202ENST00000357559 ATP10DQ9P241 1426 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 NPHP3-ACAD11A0A0J9YXS1 232 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 PDE8BO95263 885 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 RPS7P62081 194 aaKnown RBP11.11□□□□□ -0.63
FXR1-202ENST00000357559 GUCY1A3Q02108 690 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 SFR1Q86XK3 245 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 FAM118BQ9BPY3 351 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 TMEM260Q9NX78 707 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 ZSWIM5Q9P217 1185 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 SPASTQ9UBP0 616 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 SOX13Q9UN79 622 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 PDGFRBP09619 1106 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 ABCD1P33897 745 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 FEN1P39748 380 aaKnown RBP11.11□□□□□ -0.63
FXR1-202ENST00000357559 TNFAIP2Q03169 654 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 TRIM71Q2Q1W2 868 aaKnown RBP11.11□□□□□ -0.63
FXR1-202ENST00000357559 FBXO18Q8NFZ0 1043 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 MAGED4Q96JG8 741 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 TARSL2A2RTX5 802 aaKnown RBP11.11□□□□□ -0.63
FXR1-202ENST00000357559 NMT2O60551 498 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 DLGAP3O95886 979 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 CALB1P05937 261 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 CDC16Q13042 620 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 SLC39A14Q15043 492 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 PPP1R2P3Q6NXS1 205 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 SHCBP1LQ9BZQ2 653 aa11.11□□□□□ -0.63
FXR1-202ENST00000357559 MAP3K20Q9NYL2 800 aaKnown RBP11.11□□□□□ -0.63
FXR1-202ENST00000357559 CYBBP04839 570 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 APRTP07741 180 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 FLT3P36888 993 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 LRRC71Q8N4P6 559 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 PABPC5Q96DU9 382 aaKnown RBP11.1□□□□□ -0.63
FXR1-202ENST00000357559 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 AIM2O14862 343 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 LDHAP00338 332 aaKnown RBP11.1□□□□□ -0.63
FXR1-202ENST00000357559 FTLP02792 175 aaPredicted RBP11.1□□□□□ -0.63
FXR1-202ENST00000357559 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 PGM1P36871 562 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 HIC1Q14526 733 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 USP17L6PQ6QN14 398 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 POTEGQ6S5H5 508 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 COMMD2Q86X83 199 aa11.1□□□□□ -0.63
FXR1-202ENST00000357559 SRP68Q9UHB9 627 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms