RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SUGP1Q8IWZ8 645 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 LMNTD2Q8IXW0 634 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ZBED8Q8IZ13 594 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 JDP2Q8WYK2 163 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ATP6V0A1Q93050 837 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 TRIM11Q96F44 468 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 FAM84AQ96KN4 292 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ZWILCHQ9H900 591 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 NOD2Q9HC29 1040 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 MRPL47Q9HD33 250 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 ALG13Q9NP73 1137 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 GABBR1Q9UBS5 961 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 NXF1Q9UBU9 619 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 ZBTB12Q9Y330 459 aaPredicted RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 AKAP11Q9UKA4 1901 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 BCL9LQ86UU0 1499 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 IGF2BP3O00425 579 aaKnown RBP eCLIP7.28□□□□□ -1.246e-8■■□□□ 13.7
RTN4-203ENST00000357376 CES2O00748 559 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 DIAPH2O60879 1101 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 STAM2O75886 525 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 GGPS1O95749 300 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 ERFP50548 548 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 RASSF2P50749 326 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 SOX10P56693 466 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 SCYL3Q8IZE3 742 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 LRRC57Q8N9N7 239 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 PRPF38AQ8NAV1 312 aaKnown RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 ACSF2Q96CM8 615 aaPredicted RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 HES6Q96HZ4 224 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 ZNF668Q96K58 619 aaPredicted RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 PRMT6Q96LA8 375 aaPredicted RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 SIPA1L3O60292 1781 aaPredicted RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 MYH7P12883 1935 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 A0A0G2JND7 137 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 WDR64B1ANS9 1081 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 GOLGA8RI6L899 631 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 UBOX5O94941 541 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 RARAP10276 462 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 RALAP11233 206 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 MARSP56192 900 aaKnown RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 TFAMQ00059 246 aaKnown RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 PPP3CAQ08209 521 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 TSNAXIP1Q2TAA8 658 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 P3H1Q32P28 736 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 SWSAP1Q6NVH7 229 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 SCYL2Q6P3W7 929 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 ANKMY2Q8IV38 441 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 FUKQ8N0W3 1084 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 GBP7Q8N8V2 638 aaPredicted RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 TAS1R2Q8TE23 839 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 RBM15Q96T37 977 aaKnown RBP eCLIP7.28□□□□□ -1.244e-8■■■■■ 30.1
RTN4-203ENST00000357376 CALN1Q9BXU9 219 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 GINM1Q9NU53 330 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 CTNNAL1Q9UBT7 734 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 TPX2Q9ULW0 747 aaKnown RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 GINS2Q9Y248 185 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 USP20Q9Y2K6 914 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 ZHX2Q9Y6X8 837 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 SNED1Q8TER0 1413 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 TJP1Q07157 1748 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 RIPK2O43353 540 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 SNHG28P0DPA3 235 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 CNGA1P29973 690 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 GNA15P30679 374 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 PHBP35232 272 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 GABPAQ06546 454 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 STRIP1Q5VSL9 837 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 BSPRYQ5W0U4 402 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 ZNF572Q7Z3I7 529 aaPredicted RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 PPFIBP2Q8ND30 876 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 TATDN2Q93075 761 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 CNKSR1Q969H4 720 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 MXRA8Q9BRK3 442 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 WDR18Q9BV38 432 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 QTRT2Q9H974 415 aaKnown RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 PICK1Q9NRD5 415 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 UVRAGQ9P2Y5 699 aa7.28□□□□□ -1.24
RTN4-203ENST00000357376 ATF5Q9Y2D1 282 aaPredicted RBP7.28□□□□□ -1.24
RTN4-203ENST00000357376 ALS2Q96Q42 1657 aa7.27□□□□□ -1.24
RTN4-203ENST00000357376 MYO5AQ9Y4I1 1855 aaKnown RBP7.27□□□□□ -1.24
RTN4-203ENST00000357376 LRP6O75581 1613 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 CICQ96RK0 1608 aaPredicted RBP7.27□□□□□ -1.25
RTN4-203ENST00000357376 K7ERI5 159 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 SLC26A4O43511 780 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 RARGP13631 454 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 CYP11B1P15538 503 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 ARSEP51690 589 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 PSMC5P62195 406 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 LMNB2Q03252 620 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 DDR1Q08345 913 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 DNAJC3Q13217 504 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 RCN2Q14257 317 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 SPARCL1Q14515 664 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 HYIQ5T013 277 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 DAB2IPQ5VWQ8 1189 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 C1orf186Q6ZWK4 172 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 TRMT10CQ7L0Y3 403 aaKnown RBP7.27□□□□□ -1.25
RTN4-203ENST00000357376 EEPD1Q7L9B9 569 aa7.27□□□□□ -1.25
RTN4-203ENST00000357376 NOP9Q86U38 636 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms