RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 E4F1Q66K89 784 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-202ENST00000357250 TRAPPC11Q7Z392 1133 aa12.45□□□□□ -0.42
COL9A1-202ENST00000357250 TEX2Q8IWB9 1127 aa12.45□□□□□ -0.42
COL9A1-202ENST00000357250 RBM46Q8TBY0 533 aaKnown RBP12.45□□□□□ -0.42
COL9A1-202ENST00000357250 ZNF526Q8TF50 670 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-202ENST00000357250 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 PSMD14O00487 310 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 ARHGDIAP52565 204 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 BEND6Q5SZJ8 279 aaPredicted RBP12.44□□□□□ -0.42
COL9A1-202ENST00000357250 DNAJC17Q9NVM6 304 aaKnown RBP12.44□□□□□ -0.42
COL9A1-202ENST00000357250 PPP1R12AO14974 1030 aaPredicted RBP12.44□□□□□ -0.42
COL9A1-202ENST00000357250 CFLARO15519 480 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 PSMD3O43242 534 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 CDH16O75309 829 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 SPAG6O75602 509 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 PEX19P40855 299 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 PDIA2Q13087 525 aaKnown RBP12.44□□□□□ -0.42
COL9A1-202ENST00000357250 SPP2Q13103 211 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 MORF4L2Q15014 288 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 NAB2Q15742 525 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 C16orf86Q6ZW13 317 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 TGS1Q96RS0 853 aaKnown RBP12.44□□□□□ -0.42
COL9A1-202ENST00000357250 CYTH2Q99418 400 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 RIT2Q99578 217 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 WWP1Q9H0M0 922 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 FBXL5Q9UKA1 691 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 HPCAL4Q9UM19 191 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 HEY1Q9Y5J3 304 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 NCOA3Q9Y6Q9 1424 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 TMEM247A6NEH6 219 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 PPP1R37O75864 691 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL9A1-202ENST00000357250 MXD4Q14582 209 aaPredicted RBP12.44□□□□□ -0.42
COL9A1-202ENST00000357250 MTHFD1LQ6UB35 978 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 PPP1R2P1Q96PQ5 205 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 KIF20BQ96Q89 1820 aa12.44□□□□□ -0.42
COL9A1-202ENST00000357250 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 STXBP3O00186 592 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 PHF2O75151 1096 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 COL9A3Q14050 684 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 Q3C1V9 767 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 PPM1NQ8N819 430 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 DAGLBQ8NCG7 672 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 WDR24Q96S15 920 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 JPH1Q9HDC5 661 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 SIGLEC1Q9BZZ2 1709 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 C19orf81C9J6K1 198 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 NCK2O43639 380 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 YWHABP31946 246 aaKnown RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 AP2B1P63010 937 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 CDR2Q01850 454 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 YWHAHQ04917 246 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 NFX1Q12986 1120 aaKnown RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 TSTA3Q13630 321 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 AGBL2Q5U5Z8 902 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 TWF2Q6IBS0 349 aaKnown RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 ZNF677Q86XU0 584 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 PASD1Q8IV76 773 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 TRIML2Q8N7C3 387 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 SGSM3Q96HU1 749 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 BTBD6Q96KE9 485 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 ZNF212Q9UDV6 495 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 FER1L4A9Z1Z3 1794 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 FMO5P49326 533 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 ZNF211Q13398 564 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 C4orf22Q6V702 233 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 FAM47EQ6ZV65 393 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 ADGRA1Q86SQ6 560 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 NUDCD3Q8IVD9 361 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 KSR1Q8IVT5 923 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 C2orf69Q8N8R5 385 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 RDM1Q8NG50 284 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 ERGIC2Q96RQ1 377 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 KIF9Q9HAQ2 790 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 FLT1P17948 1338 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 SNX2O60749 519 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 TRIM49P0CI25 452 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 TRIM49CP0CI26 452 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 UCHL3P15374 230 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 RECQLP46063 649 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 GRIN1Q05586 938 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 TRADDQ15628 312 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 HIF1AQ16665 826 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 FAM102AQ5T9C2 384 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 PRAMEF18Q5VWM3 479 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 KCNB2Q92953 911 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 HPS3Q969F9 1004 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 IFT43Q96FT9 208 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 ROPN1BQ9BZX4 212 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 VPS11Q9H270 941 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 ROPN1Q9HAT0 212 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-202ENST00000357250 L3MBTL1Q9Y468 752 aa12.43□□□□□ -0.42
COL9A1-202ENST00000357250 PFDN1O60925 122 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 KIF19Q2TAC6 998 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 FBXO33Q7Z6M2 555 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 ARHGAP18Q8N392 663 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 FRMD8Q9BZ67 464 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms