RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 RNF25Q96BH1 459 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 INO80BQ9C086 356 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 THAP2Q9H0W7 228 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 A0A1W2PQJ5 194 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 TTC36A6NLP5 189 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 PPP1R12AO14974 1030 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 UBTFL6P0CB48 400 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 CTCFP49711 727 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 PHEXP78562 749 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 ORC2Q13416 577 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 LRRC55Q6ZSA7 311 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 IWS1Q96ST2 819 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 TMEM206Q9H813 350 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 FAM198AQ9UFP1 575 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 MAGED2Q9UNF1 606 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 SRCAPQ6ZRS2 3230 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 C5P01031 1676 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 CCDC188H7C350 402 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 KLC1Q07866 573 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 BRDTQ58F21 947 aaPredicted RBP14.97□□□□□ -0.01
SREBF1-202ENST00000355815 TRPM8Q7Z2W7 1104 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 CDR2LQ86X02 465 aaPredicted RBP14.97□□□□□ -0.01
SREBF1-202ENST00000355815 SLC17A8Q8NDX2 589 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 XPO6Q96QU8 1125 aaKnown RBP14.97□□□□□ -0.01
SREBF1-202ENST00000355815 UNC45AQ9H3U1 944 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 CYP4F11Q9HBI6 524 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 ZFP69BQ9UJL9 534 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 TRPC6Q9Y210 931 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.97□□□□□ -0.01
SREBF1-202ENST00000355815 KIF1AQ12756 1690 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 SMARCA1P28370 1054 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 RXRBP28702 533 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 SLC20A2Q08357 652 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 SCYL2Q6P3W7 929 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 CASKIN2Q8WXE0 1202 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 TAAR1Q96RJ0 339 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.97□□□□□ -0.01
SREBF1-202ENST00000355815 K7ERI5 159 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 CDR2Q01850 454 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 MKRN3Q13064 507 aaKnown RBP14.97□□□□□ -0.01
SREBF1-202ENST00000355815 CUL3Q13618 768 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 EDRF1Q3B7T1 1238 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 LCA5Q86VQ0 697 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 TEKT4Q8WW24 435 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 ZDHHC15Q96MV8 337 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 NUP85Q9BW27 656 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 SUGT1Q9Y2Z0 365 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 MEIS2O14770 477 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 NCF2P19878 526 aaPredicted RBP14.97□□□□□ -0.01
SREBF1-202ENST00000355815 YWHABP31946 246 aaKnown RBP14.97□□□□□ -0.01
SREBF1-202ENST00000355815 NT5C2P49902 561 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 MEA1Q16626 185 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 OLFML2BQ68BL8 750 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 TMEM270Q6UE05 265 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 FAM160B2Q86V87 743 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 TRIML2Q8N7C3 387 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 TSEN2Q8NCE0 465 aaKnown RBP14.97□□□□□ -0.01
SREBF1-202ENST00000355815 CPA5Q8WXQ8 436 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 SLC7A3Q8WY07 619 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 TMEM143Q96AN5 459 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 ERP27Q96DN0 273 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 CENPKQ9BS16 269 aa14.97□□□□□ -0.01
SREBF1-202ENST00000355815 CCT8L1PA6NM43 557 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 ZBBXA8MT70 800 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 GOLGA8RI6L899 631 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 DKC1O60832 514 aaKnown RBP eCLIP14.96□□□□□ -0.015e-7■■■■□ 19.3
SREBF1-202ENST00000355815 TOM1L1O75674 476 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 EPHA7Q15375 998 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 LONRF1Q17RB8 773 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 C1orf146Q5VVC0 180 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 SLC20A1Q8WUM9 679 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 VCPKMTQ9H867 229 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 AGPAT3Q9NRZ7 376 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 GRID2IPA4D2P6 1211 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 PI4K2BG5E9Z4 385 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 SUPT3HO75486 399 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 BTKQ06187 659 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 PPP4R1Q8TF05 950 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 PRPF31Q8WWY3 499 aaKnown RBP14.96□□□□□ -0.01
SREBF1-202ENST00000355815 EDEM3Q9BZQ6 932 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 Q9H521 79 aa14.96□□□□□ -0.01
SREBF1-202ENST00000355815 CFAP73A6NFT4 308 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 MT-ND3P03897 115 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 RPS6P62753 249 aaKnown RBP14.96□□□□□ -0.02
SREBF1-202ENST00000355815 GPC5P78333 572 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 SYCP2LQ5T4T6 812 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 CDAN1Q8IWY9 1227 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 USP38Q8NB14 1042 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 ATP6V0A1Q93050 837 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 FAM163AQ96GL9 167 aaPredicted RBP14.96□□□□□ -0.02
SREBF1-202ENST00000355815 SAYSD1Q9NPB0 183 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 BATF3Q9NR55 127 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 SMYD2Q9NRG4 433 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 HSPBP1Q9NZL4 362 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 APEX2Q9UBZ4 518 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 RAB21Q9UL25 225 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 ALG6Q9Y672 507 aa14.96□□□□□ -0.02
SREBF1-202ENST00000355815 AP1G2O75843 785 aa14.95□□□□□ -0.02
SREBF1-202ENST00000355815 SCTRP47872 440 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms