RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CCND2P30279 289 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 BCAR1P56945 870 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 METTL23Q86XA0 190 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 PASD1Q8IV76 773 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 LARGE2Q8N3Y3 721 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 GALNT4Q8N4A0 578 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 AGPAT5Q9NUQ2 364 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 ATP8B3O60423 1300 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 P3H1Q32P28 736 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 ANKMY2Q8IV38 441 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 MANSC1Q9H8J5 431 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 NEU2Q9Y3R4 380 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 WDR17Q8IZU2 1322 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 PJA2O43164 708 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 ARHGAP22Q7Z5H3 698 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 PRLRP16471 622 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 TARSP26639 723 aaKnown RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 BTKQ06187 659 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 LVRNQ6Q4G3 990 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 SNX19Q92543 992 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 CCSER1Q9C0I3 900 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 SYBUQ9NX95 663 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 H3BQF6 201 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 ITPRIPL1Q6GPH6 555 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 GPR141Q7Z602 305 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZBTB33Q86T24 672 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 PRPF39Q86UA1 669 aaKnown RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 PCYOX1LQ8NBM8 494 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 FSD1LQ9BXM9 530 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 ATP7AQ04656 1500 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 RHOBTB3O94955 611 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 SLC4A1P02730 911 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 FCER1AP12319 257 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 GNA15P30679 374 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 GALCP54803 685 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 MFN1Q8IWA4 741 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 TMA16Q96EY4 203 aaKnown RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 LBHD1Q9BQE6 289 aaPredicted RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 STK33Q9BYT3 514 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 XDHP47989 1333 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 H0YIN7 160 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 PDXKO00764 312 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 USP17L8P0C7I0 530 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 ATP6V1B1P15313 513 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 FASTKD1Q53R41 847 aaKnown RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 OLA1Q9NTK5 396 aaKnown RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 PRDM15P57071 1507 aaPredicted RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 MECOMQ03112 1051 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 CLEC4FQ8N1N0 589 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZNF280CQ8ND82 737 aa13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 SYN2Q92777 582 aaPredicted RBP13.41□□□□□ -0.26
SYNCRIP-201ENST00000355238 CYP2D7A0A087X1C5 515 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 SRP72O76094 671 aaKnown RBP13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 USP11P51784 963 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 EXOSC10Q01780 885 aaKnown RBP13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 SLC29A2Q14542 456 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 MDM1Q8TC05 714 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 MAGEB18Q96M61 343 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 PABPC3Q9H361 631 aaKnown RBP13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 PDS5AQ29RF7 1337 aaKnown RBP13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 VCAM1P19320 739 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 PRELPP51888 382 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 JAK3P52333 1124 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 MTERF2Q49AM1 385 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 CCDC24Q8N4L8 307 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 C9orf72Q96LT7 481 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 SDC4P31431 198 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 MCAMP43121 646 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 SCNN1DP51172 638 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 RUNX1T1Q06455 604 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 PATL1Q86TB9 770 aaKnown RBP13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 CATSPER2Q96P56 530 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 GJA3Q9Y6H8 435 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 MAGEA4P43358 317 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 HSPA2P54652 639 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 NSUN2Q08J23 767 aaKnown RBP eCLIP13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 TTC33Q6PID6 262 aaPredicted RBP13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 SIKE1Q9BRV8 207 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 SLC5A4Q9NY91 659 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 NCOA3Q9Y6Q9 1424 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 POTECB2RU33 542 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 DCAF15Q66K64 600 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 PACS2Q86VP3 889 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 STX19Q8N4C7 294 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 MCPH1Q8NEM0 835 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 ANKS1AQ92625 1134 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 OPTNQ96CV9 577 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 DYNLL2Q96FJ2 89 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZNF212Q9UDV6 495 aa13.4□□□□□ -0.26
SYNCRIP-201ENST00000355238 AKT3Q9Y243 479 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms