RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ANKRD65E5RJM6 399 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 HMBSP08397 361 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 KYAT1Q16773 422 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 NUDCD3Q8IVD9 361 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 DDIASQ8IXT1 998 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 YAF2Q8IY57 180 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 SLC30A5Q8TAD4 765 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 LZICQ8WZA0 190 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 TRIM33Q9UPN9 1127 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 NDUFB10O96000 172 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 SETSIPP0DME0 302 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 SCP2P22307 547 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 ATICP31939 592 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 CC2D1AQ6P1N0 951 aaPredicted RBP13.98□□□□□ -0.17
SCN8A-202ENST00000355133 ANKMY2Q8IV38 441 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 CPA5Q8WXQ8 436 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 COG4Q9H9E3 785 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 ASAP2O43150 1006 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 UPP2O95045 317 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 ATP1A1P05023 1023 aaKnown RBP13.98□□□□□ -0.17
SCN8A-202ENST00000355133 TYK2P29597 1187 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 POLE2P56282 527 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 TPI1P60174 286 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 ZNF543Q08ER8 600 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 STRIP1Q5VSL9 837 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 APPL2Q8NEU8 664 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 ADA2Q9NZK5 511 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 FBXO2Q9UK22 296 aaPredicted RBP13.98□□□□□ -0.17
SCN8A-202ENST00000355133 PLA2R1Q13018 1463 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 EIF3EP60228 445 aaKnown RBP13.98□□□□□ -0.17
SCN8A-202ENST00000355133 KRT17Q04695 432 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 C1orf146Q5VVC0 180 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 SLC26A7Q8TE54 656 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 MORC4Q8TE76 937 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 TGS1Q96RS0 853 aaKnown RBP13.98□□□□□ -0.17
SCN8A-202ENST00000355133 EPC1Q9H2F5 836 aa13.98□□□□□ -0.17
SCN8A-202ENST00000355133 PDXKO00764 312 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 C6orf222P0C671 652 aaPredicted RBP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 PYGBP11216 843 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 ZFXP17010 805 aaPredicted RBP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 VCPP55072 806 aaKnown RBP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 EFTUD2Q15029 972 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 RGS9BPQ6ZS82 235 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 DDX53Q86TM3 631 aaKnown RBP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 NRKQ7Z2Y5 1582 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 PRPF4O43172 522 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 HAUS5O94927 633 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 ZNF467Q7Z7K2 595 aaPredicted RBP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 ATP11CQ8NB49 1132 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 TEX13BQ9BXU2 312 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 ZNF212Q9UDV6 495 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 TADA2AO75478 443 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 PRR5LQ6MZQ0 368 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 CDC42EP5Q6NZY7 148 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 PGBD4Q96DM1 585 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 ZNF70Q9UC06 446 aaPredicted RBP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 ZC3H4Q9UPT8 1303 aaKnown RBP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 KCNN4O15554 427 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 RTN2O75298 545 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 PDGFRBP09619 1106 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 SESN2P58004 480 aaPredicted RBP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 TAP1Q03518 808 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
SCN8A-202ENST00000355133 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
SCN8A-202ENST00000355133 ZNF157P51786 506 aaPredicted RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 PPP2R2AP63151 447 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 PDIA5Q14554 519 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 XKR3Q5GH77 459 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 ANGEL2Q5VTE6 544 aaKnown RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 USP33Q8TEY7 942 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 AGAP3Q96P47 875 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 TAF1DQ9H5J8 278 aaPredicted RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 ALG13Q9NP73 1137 aaKnown RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 KCNA2P16389 499 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 FGFR4P22455 802 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 GNL1P36915 607 aaPredicted RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 HSD17B4P51659 736 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 ARFIP2P53365 341 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 RNF168Q8IYW5 571 aaPredicted RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 CRAMP1Q96RY5 1269 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 REEP2Q9BRK0 252 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 FAM96AQ9H5X1 160 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 SETD1BQ9UPS6 1966 aaKnown RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 FAM187AA6NFU0 413 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 CYP2B6P20813 491 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 EPAS1Q99814 870 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 TRIM54Q9BYV2 358 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 AIPL1Q9NZN9 384 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 LIMA1Q9UHB6 759 aaKnown RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 SFMBT1Q9UHJ3 866 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 CHGBP05060 677 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 ABTB1Q969K4 478 aaPredicted RBP13.96□□□□□ -0.17
SCN8A-202ENST00000355133 C18orf8Q96DM3 657 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 CYP4F11Q9HBI6 524 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 TEKT2Q9UIF3 430 aa13.96□□□□□ -0.17
SCN8A-202ENST00000355133 CCDC78A2IDD5 438 aa13.96□□□□□ -0.18
SCN8A-202ENST00000355133 DGAT1O75907 488 aa13.96□□□□□ -0.18
SCN8A-202ENST00000355133 SYF2O95926 243 aaKnown RBP13.96□□□□□ -0.18
SCN8A-202ENST00000355133 MTF1Q14872 753 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms