RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PRSS55Q6UWB4 352 aaPredicted RBP17.56■□□□□ 0.4
PDGFA-201ENST00000354513 PALB2Q86YC2 1186 aa17.56■□□□□ 0.4
PDGFA-201ENST00000354513 GLYCTKQ8IVS8 523 aa17.56■□□□□ 0.4
PDGFA-201ENST00000354513 MCPH1Q8NEM0 835 aa17.56■□□□□ 0.4
PDGFA-201ENST00000354513 ATOH1Q92858 354 aaPredicted RBP17.56■□□□□ 0.4
PDGFA-201ENST00000354513 PRMT7Q9NVM4 692 aaPredicted RBP17.56■□□□□ 0.4
PDGFA-201ENST00000354513 FNIP2Q9P278 1114 aa17.56■□□□□ 0.4
PDGFA-201ENST00000354513 PARP2Q9UGN5 583 aa17.56■□□□□ 0.4
PDGFA-201ENST00000354513 PROB1E7EW31 1015 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 PI15O43692 258 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 KIF4AO95239 1232 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 RPA1P27694 616 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 CLCN5P51795 746 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 NCBP1Q09161 790 aaKnown RBP17.55■□□□□ 0.4
PDGFA-201ENST00000354513 TRIM29Q14134 588 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 HSP90AA2PQ14568 343 aaPredicted RBP17.55■□□□□ 0.4
PDGFA-201ENST00000354513 ZNF174Q15697 407 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 USP41Q3LFD5 358 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 CCDC83Q8IWF9 413 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 GPR65Q8IYL9 337 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 HACE1Q8IYU2 909 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 C4orf32Q8N8J7 132 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 HASPINQ8TF76 798 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 HDAC7Q8WUI4 952 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 RIN2Q8WYP3 895 aaPredicted RBP17.55■□□□□ 0.4
PDGFA-201ENST00000354513 SMG7Q92540 1137 aaKnown RBP17.55■□□□□ 0.4
PDGFA-201ENST00000354513 KIFC3Q9BVG8 833 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 NT5C3AQ9H0P0 336 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 SNTG2Q9NY99 539 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 EPS15L1Q9UBC2 864 aa17.55■□□□□ 0.4
PDGFA-201ENST00000354513 CASTOR2A6NHX0 329 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 GFRA3O60609 400 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 RECQL4O94761 1208 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 C1RP00736 705 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 CYP11B2P19099 503 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 TUSC3Q13454 348 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 NBR1Q14596 966 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 PADI6Q6TGC4 694 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 CYP26C1Q6V0L0 522 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 NACC1Q96RE7 527 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 POLD4Q9HCU8 107 aa17.54■□□□□ 0.4
PDGFA-201ENST00000354513 KRBA1A5PL33 1030 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 N4BP3O15049 544 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 ADAM12O43184 909 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 PRKCBP05771 671 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 AOC1P19801 751 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 ASCL5Q7RTU5 278 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 NOSTRINQ8IVI9 506 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 ZBTB8OSQ8IWT0 167 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 KIF2CQ99661 725 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 CLSTN3Q9BQT9 956 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDGFA-201ENST00000354513 IGSF9Q9P2J2 1179 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 FBXW11Q9UKB1 542 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 COL4A2P08572 1712 aa17.53■□□□□ 0.4
PDGFA-201ENST00000354513 ST18O60284 1047 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 NR1I2O75469 434 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 GBP2P32456 591 aaPredicted RBP17.52■□□□□ 0.4
PDGFA-201ENST00000354513 NBL1P41271 181 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 NAMPTP43490 491 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 ORC2Q13416 577 aaPredicted RBP17.52■□□□□ 0.4
PDGFA-201ENST00000354513 TTC38Q5R3I4 469 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 NT5DC1Q5TFE4 455 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 CD300LGQ6UXG3 332 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 FLCNQ8NFG4 579 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 LNX1Q8TBB1 728 aaPredicted RBP17.52■□□□□ 0.4
PDGFA-201ENST00000354513 PIK3R5Q8WYR1 880 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 C8orf76Q96K31 380 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 PRKD2Q9BZL6 878 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 C2orf40Q9H1Z8 148 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 FOXP1Q9H334 677 aaPredicted RBP17.52■□□□□ 0.4
PDGFA-201ENST00000354513 PLEKHA4Q9H4M7 779 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 ZDHHC7Q9NXF8 308 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 LIMCH1Q9UPQ0 1083 aa17.52■□□□□ 0.4
PDGFA-201ENST00000354513 ZFHX2Q9C0A1 2572 aaPredicted RBP17.52■□□□□ 0.4
PDGFA-201ENST00000354513 SF3B1O75533 1304 aaKnown RBP eCLIP17.52■□□□□ 0.42e-9■■■■■ 80.4
PDGFA-201ENST00000354513 ANK1P16157 1881 aa17.52■□□□□ 0.39
PDGFA-201ENST00000354513 ACKR2O00590 384 aa17.51■□□□□ 0.39
PDGFA-201ENST00000354513 ZMYND10O75800 440 aa17.51■□□□□ 0.39
PDGFA-201ENST00000354513 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
PDGFA-201ENST00000354513 PRPF4BQ13523 1007 aaKnown RBP17.51■□□□□ 0.39
PDGFA-201ENST00000354513 GET4Q7L5D6 327 aaPredicted RBP17.51■□□□□ 0.39
PDGFA-201ENST00000354513 SIX5Q8N196 739 aa17.51■□□□□ 0.39
PDGFA-201ENST00000354513 SLC44A3Q8N4M1 653 aa17.51■□□□□ 0.39
PDGFA-201ENST00000354513 FBXO18Q8NFZ0 1043 aa17.51■□□□□ 0.39
PDGFA-201ENST00000354513 LLPHQ9BRT6 129 aaKnown RBP17.51■□□□□ 0.39
PDGFA-201ENST00000354513 IRF2BPLQ9H1B7 796 aa17.51■□□□□ 0.39
PDGFA-201ENST00000354513 MFSD1Q9H3U5 465 aa17.51■□□□□ 0.39
PDGFA-201ENST00000354513 ARHGEF35A5YM69 484 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 PRR23AA6NEV1 266 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 ANHXE9PGG2 379 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 TADA2AO75478 443 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 CFHP08603 1231 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 TOB1P50616 345 aaPredicted RBP17.5■□□□□ 0.39
PDGFA-201ENST00000354513 NTHL1P78549 312 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 HTR4Q13639 388 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 SAFBQ15424 915 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDGFA-201ENST00000354513 PSMD5Q16401 504 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 MAPK6Q16659 721 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms