RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 HOXB3P14651 431 aaPredicted RBP17.69■□□□□ 0.42
DDX55-202ENST00000354291 RTP2Q5QGT7 225 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 ANO5Q75V66 913 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 CEP57Q86XR8 500 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 NPAS3Q8IXF0 933 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 GPR65Q8IYL9 337 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 CLSTN3Q9BQT9 956 aa17.69■□□□□ 0.42
DDX55-202ENST00000354291 ERLIN2O94905 339 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 PMLP29590 882 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 GNA11P29992 359 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 CDC27P30260 824 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 NPEPPSP55786 919 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 LAMTOR4Q0VGL1 99 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 PABPC1LQ4VXU2 614 aaKnown RBP17.68■□□□□ 0.42
DDX55-202ENST00000354291 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.68■□□□□ 0.42
DDX55-202ENST00000354291 RASEFQ8IZ41 740 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 RDM1Q8NG50 284 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 CCDC12Q8WUD4 166 aaPredicted RBP17.68■□□□□ 0.42
DDX55-202ENST00000354291 PSPC1Q8WXF1 523 aaKnown RBP17.68■□□□□ 0.42
DDX55-202ENST00000354291 SLC7A3Q8WY07 619 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 CPB2Q96IY4 423 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 TCEANC2Q96MN5 208 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 CHRDQ9H2X0 955 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 LMAN1LQ9HAT1 526 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 BMP2KQ9NSY1 1161 aaPredicted RBP17.68■□□□□ 0.42
DDX55-202ENST00000354291 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 MRPS23Q9Y3D9 190 aaKnown RBP17.68■□□□□ 0.42
DDX55-202ENST00000354291 SDK1Q7Z5N4 2213 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
DDX55-202ENST00000354291 ESYT2A0FGR8 921 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 SHISA7A6NL88 538 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 MAN2B1O00754 1011 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 HRO43593 1189 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 EDIL3O43854 480 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 ECI2O75521 394 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 PSMD10O75832 226 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 AKAP5P24588 427 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 ADD1P35611 737 aaKnown RBP17.67■□□□□ 0.42
DDX55-202ENST00000354291 NCBP1Q09161 790 aaKnown RBP17.67■□□□□ 0.42
DDX55-202ENST00000354291 SRSF5Q13243 272 aaKnown RBP17.67■□□□□ 0.42
DDX55-202ENST00000354291 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 TANGO2Q6ICL3 276 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 ZNF579Q8NAF0 562 aaKnown RBP17.67■□□□□ 0.42
DDX55-202ENST00000354291 RNF149Q8NC42 400 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 SLC7A14Q8TBB6 771 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 HASPINQ8TF76 798 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 TRIM6Q9C030 488 aaPredicted RBP17.67■□□□□ 0.42
DDX55-202ENST00000354291 DNMT3BQ9UBC3 853 aaKnown RBP17.67■□□□□ 0.42
DDX55-202ENST00000354291 KCNH3Q9ULD8 1083 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 GIT1Q9Y2X7 761 aa17.67■□□□□ 0.42
DDX55-202ENST00000354291 CHURC1-FNTBB4DL54 471 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 CXCL12P48061 93 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 FNTBP49356 437 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 CCR3P51677 355 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 ACAP1Q15027 740 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 PSMD5Q16401 504 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
DDX55-202ENST00000354291 FAM171A1Q5VUB5 890 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 NOTUMQ6P988 496 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 CEP170P1Q96L14 293 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 TTPALQ9BTX7 342 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 KLK14Q9P0G3 267 aa17.66■□□□□ 0.42
DDX55-202ENST00000354291 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 ADAM12O43184 909 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 PROS1P07225 676 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 HOXA9P31269 272 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 USP11P51784 963 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 RCAN1P53805 252 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 PSMC5P62195 406 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 SHC2P98077 582 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 FGD1P98174 961 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 SATB1Q01826 763 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 GRM2Q14416 872 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
DDX55-202ENST00000354291 AASDHQ4L235 1098 aaPredicted RBP17.65■□□□□ 0.42
DDX55-202ENST00000354291 MAMSTRQ6ZN01 415 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 HACE1Q8IYU2 909 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 LNX1Q8TBB1 728 aaPredicted RBP17.65■□□□□ 0.42
DDX55-202ENST00000354291 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 CSRNP2Q9H175 543 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 NXF3Q9H4D5 531 aaKnown RBP17.65■□□□□ 0.42
DDX55-202ENST00000354291 BRD9Q9H8M2 597 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 PARP2Q9UGN5 583 aa17.65■□□□□ 0.42
DDX55-202ENST00000354291 SF3B1O75533 1304 aaKnown RBP eCLIP17.65■□□□□ 0.423e-6■■■■■ 88.4
DDX55-202ENST00000354291 FOXD2O60548 495 aaPredicted RBP17.64■□□□□ 0.41
DDX55-202ENST00000354291 TSPAN1O60635 241 aa17.64■□□□□ 0.41
DDX55-202ENST00000354291 AXLP30530 894 aa17.64■□□□□ 0.41
DDX55-202ENST00000354291 HEATR6Q6AI08 1181 aaKnown RBP17.64■□□□□ 0.41
DDX55-202ENST00000354291 ZNF687Q8N1G0 1237 aa17.64■□□□□ 0.41
DDX55-202ENST00000354291 GSTCDQ8NEC7 633 aa17.64■□□□□ 0.41
DDX55-202ENST00000354291 FAM3CQ92520 227 aa17.64■□□□□ 0.41
DDX55-202ENST00000354291 KCNB2Q92953 911 aa17.64■□□□□ 0.41
DDX55-202ENST00000354291 PAAF1Q9BRP4 392 aa17.64■□□□□ 0.41
DDX55-202ENST00000354291 GDE1Q9NZC3 331 aa17.64■□□□□ 0.41
DDX55-202ENST00000354291 RALGAPA1Q6GYQ0 2036 aa17.64■□□□□ 0.41
DDX55-202ENST00000354291 PKD1L2Q7Z442 2459 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 CCDC196A0A1B0GTZ2 297 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 INO80B-WBP1J3KQ70 363 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 ASAP2O43150 1006 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 OR1D2P34982 312 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms