RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 RBAKQ9NYW8 714 aaPredicted RBP21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 CPSF3Q9UKF6 684 aaKnown RBP21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 PADI3Q9ULW8 664 aa21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 RBAK-RBAKDNI3L0D1 243 aa21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 AFPP02771 609 aaKnown RBP21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 CDC25BP30305 580 aa21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 ENPEPQ07075 957 aa21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 KYAT1Q16773 422 aa21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 PARD3BQ8TEW8 1205 aa21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 EIF2AQ9BY44 585 aaKnown RBP21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 CHST12Q9NRB3 414 aa21.87■■□□□ 1.09
SIGMAR1-202ENST00000353468 CLTAP09496 248 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 TRIM49P0CI25 452 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 TRIM49CP0CI26 452 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 STAG3L1P0CL83 205 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 OSTNP61366 133 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 DLG4P78352 724 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 MBTPS1Q14703 1052 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 PSMD6Q15008 389 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 FKBP15Q5T1M5 1219 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 USP37Q86T82 979 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 BRSK2Q8IWQ3 736 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 CCDC127Q96BQ5 260 aa21.86■■□□□ 1.09
SIGMAR1-202ENST00000353468 TULP1O00294 542 aaPredicted RBP21.85■■□□□ 1.09
SIGMAR1-202ENST00000353468 PTPN21Q16825 1174 aa21.85■■□□□ 1.09
SIGMAR1-202ENST00000353468 UBXN11Q5T124 520 aa21.85■■□□□ 1.09
SIGMAR1-202ENST00000353468 TWF2Q6IBS0 349 aaKnown RBP21.85■■□□□ 1.09
SIGMAR1-202ENST00000353468 PDLIM2Q96JY6 352 aa21.85■■□□□ 1.09
SIGMAR1-202ENST00000353468 FNBP1Q96RU3 617 aa21.85■■□□□ 1.09
SIGMAR1-202ENST00000353468 TRIM6Q9C030 488 aaPredicted RBP21.85■■□□□ 1.09
SIGMAR1-202ENST00000353468 HIPK3Q9H422 1215 aa21.85■■□□□ 1.09
SIGMAR1-202ENST00000353468 RPF1Q9H9Y2 349 aaKnown RBP21.85■■□□□ 1.09
SIGMAR1-202ENST00000353468 LRRIQ3A6PVS8 624 aaPredicted RBP21.84■■□□□ 1.09
SIGMAR1-202ENST00000353468 ZSCAN20P17040 1043 aaPredicted RBP21.84■■□□□ 1.09
SIGMAR1-202ENST00000353468 GRM5P41594 1212 aa21.84■■□□□ 1.09
SIGMAR1-202ENST00000353468 POU5F1Q01860 360 aaKnown RBP21.84■■□□□ 1.09
SIGMAR1-202ENST00000353468 C1orf220Q5T0J3 134 aa21.84■■□□□ 1.09
SIGMAR1-202ENST00000353468 VSTM4Q8IW00 320 aa21.84■■□□□ 1.09
SIGMAR1-202ENST00000353468 DRC7Q8IY82 874 aa21.84■■□□□ 1.09
SIGMAR1-202ENST00000353468 TMEM192Q8IY95 271 aa21.84■■□□□ 1.09
SIGMAR1-202ENST00000353468 PDE11AQ9HCR9 933 aa21.84■■□□□ 1.09
SIGMAR1-202ENST00000353468 DLATP10515 647 aaKnown RBP21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 PBX1P40424 430 aa21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 WNT7BP56706 349 aa21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 CCDC173Q0VFZ6 552 aa21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 ENOX2Q16206 610 aaKnown RBP21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 UBE2Q1Q7Z7E8 422 aa21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 ACAP3Q96P50 834 aa21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 ERGIC2Q96RQ1 377 aa21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 POP1Q99575 1024 aaKnown RBP21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 CCDC94Q9BW85 323 aaPredicted RBP21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 MMRN2Q9H8L6 949 aa21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 TMEM39AQ9NV64 488 aa21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 TBX21Q9UL17 535 aa21.83■■□□□ 1.09
SIGMAR1-202ENST00000353468 UMODL1Q5DID0 1318 aa21.83■■□□□ 1.08
SIGMAR1-202ENST00000353468 A0A1W2PQC6 194 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 STX10O60499 249 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 CLTBP09497 229 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 FMO5P49326 533 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 PPP3CAQ08209 521 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 SURF1Q15526 300 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 FAM212AQ96EL1 285 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 PPP1R12CQ9BZL4 782 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 TMX1Q9H3N1 280 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 NBNO60934 754 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 CXCL8P10145 99 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 CLDN10P78369 228 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 DSC3Q14574 896 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 GPNMBQ14956 572 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 TMC6Q7Z403 805 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 SPC24Q8NBT2 197 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 IFIH1Q9BYX4 1025 aaKnown RBP21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 SNTG2Q9NY99 539 aa21.82■■□□□ 1.08
SIGMAR1-202ENST00000353468 MGEA5O60502 916 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 N4BP1O75113 896 aaKnown RBP21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 IL18RAPO95256 599 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 PARNO95453 639 aaKnown RBP21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 TNNI1P19237 187 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 GTF2H1P32780 548 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 GCLMP48507 274 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 SYCP1Q15431 976 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 SLC10A6Q3KNW5 377 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 CBWD6Q4V339 395 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 CBWD3Q5JTY5 395 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 CBWD5Q5RIA9 395 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 SPECC1LQ69YQ0 1117 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 PPP1R9BQ96SB3 815 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 NXF3Q9H4D5 531 aaKnown RBP21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 TOPORSQ9NS56 1045 aaPredicted RBP21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 FAM105AQ9NUU6 356 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 HES2Q9Y543 173 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 IPPQ9Y573 584 aa21.81■■□□□ 1.08
SIGMAR1-202ENST00000353468 GTPBP10A4D1E9 387 aaKnown RBP21.8■■□□□ 1.08
SIGMAR1-202ENST00000353468 CYP2C18P33260 490 aa21.8■■□□□ 1.08
SIGMAR1-202ENST00000353468 CCL23P55773 120 aa21.8■■□□□ 1.08
SIGMAR1-202ENST00000353468 KCNMA1Q12791 1236 aa21.8■■□□□ 1.08
SIGMAR1-202ENST00000353468 SMG8Q8ND04 991 aaKnown RBP21.8■■□□□ 1.08
SIGMAR1-202ENST00000353468 SCLYQ96I15 445 aa21.8■■□□□ 1.08
SIGMAR1-202ENST00000353468 CGRRF1Q99675 332 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms