RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SLC37A4O43826 429 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 HSP90AA5PQ58FG0 334 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 GJB7Q6PEY0 223 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 MMS22LQ6ZRQ5 1243 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 OR2W6PQ8NHA6 318 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 KCNV2Q8TDN2 545 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 ANKRD7Q92527 254 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 KCNB2Q92953 911 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 ANLNQ9NQW6 1124 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 HAUS5O94927 633 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.312e-9■■■■□ 19.4
PTPN11-201ENST00000351677 NSUN2Q08J23 767 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTPN11-201ENST00000351677 ATL2Q8NHH9 583 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 ALKBH8Q96BT7 664 aaKnown RBP16.97■□□□□ 0.31
PTPN11-201ENST00000351677 PRMT1Q99873 361 aaKnown RBP16.97■□□□□ 0.31
PTPN11-201ENST00000351677 GTSE1Q9NYZ3 720 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 GGT7Q9UJ14 662 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 MDM2Q00987 491 aaPredicted RBP16.97■□□□□ 0.31
PTPN11-201ENST00000351677 ACTN3Q08043 901 aaPredicted RBP16.97■□□□□ 0.31
PTPN11-201ENST00000351677 EDRF1Q3B7T1 1238 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 TMEM117Q9H0C3 514 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 ZNF70Q9UC06 446 aaPredicted RBP16.97■□□□□ 0.31
PTPN11-201ENST00000351677 STAP1Q9ULZ2 295 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 POLRMTO00411 1230 aaKnown RBP16.96■□□□□ 0.31
PTPN11-201ENST00000351677 ATMINO43313 823 aaPredicted RBP16.96■□□□□ 0.31
PTPN11-201ENST00000351677 NCOA3Q9Y6Q9 1424 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 DGAT1O75907 488 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 EIF3EP60228 445 aaKnown RBP16.96■□□□□ 0.31
PTPN11-201ENST00000351677 KRT80Q6KB66 452 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 PARD3BQ8TEW8 1205 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 PSMD14O00487 310 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 COG2Q14746 738 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 NOP9Q86U38 636 aaKnown RBP16.96■□□□□ 0.31
PTPN11-201ENST00000351677 RASSF3Q86WH2 238 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 CATSPER3Q86XQ3 398 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 GCOM2Q9BZD3 368 aaPredicted RBP16.96■□□□□ 0.31
PTPN11-201ENST00000351677 SUCLA2Q9P2R7 463 aaPredicted RBP16.96■□□□□ 0.31
PTPN11-201ENST00000351677 RAD51CO43502 376 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 PHF2O75151 1096 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 PLEKP08567 350 aaPredicted RBP16.96■□□□□ 0.31
PTPN11-201ENST00000351677 SLC1A1P43005 524 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 SH3BGRP55822 239 aaPredicted RBP16.96■□□□□ 0.31
PTPN11-201ENST00000351677 MICALL2Q8IY33 904 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 CCNYL1Q8N7R7 359 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 PDCD6IPQ8WUM4 868 aaKnown RBP16.96■□□□□ 0.31
PTPN11-201ENST00000351677 ZNRF3Q9ULT6 936 aa16.96■□□□□ 0.31
PTPN11-201ENST00000351677 GOLGA8RI6L899 631 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 CHEK2O96017 543 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 ELF1P32519 619 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 EFNA5P52803 228 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 ARFIP2P53365 341 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 AP3M2P53677 418 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 FAM118BQ9BPY3 351 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 CHORDC1Q9UHD1 332 aaPredicted RBP16.95■□□□□ 0.3
PTPN11-201ENST00000351677 GPR75-ASB3A0A0A6YYF3 556 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 A0A1W2PQJ5 194 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 TXNP10599 105 aaKnown RBP16.95■□□□□ 0.3
PTPN11-201ENST00000351677 TSPY1Q01534 308 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 POU5F1BQ06416 359 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 HIF1AQ16665 826 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 XKR3Q5GH77 459 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 HPCAL4Q9UM19 191 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 DIAPH2O60879 1101 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 POLE2P56282 527 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 NYAP1Q6ZVC0 841 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 ETNK1Q9HBU6 452 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 ENTPD3O75355 529 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 MOCS2O96007 188 aaPredicted RBP16.95■□□□□ 0.3
PTPN11-201ENST00000351677 SMARCA1P28370 1054 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 TOB1P50616 345 aaPredicted RBP16.95■□□□□ 0.3
PTPN11-201ENST00000351677 LONRF1Q17RB8 773 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 EFHC2Q5JST6 749 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 NUDCD3Q8IVD9 361 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 TIPINQ9BVW5 301 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 SIK2Q9H0K1 926 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 VCPKMTQ9H867 229 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 RNF181Q9P0P0 153 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 KPNA7A9QM74 516 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 KLRC1P26715 233 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 RPA1P27694 616 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 PAPOLAP51003 745 aaKnown RBP16.95■□□□□ 0.3
PTPN11-201ENST00000351677 TAP1Q03518 808 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 P3H1Q32P28 736 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 CDKL3Q8IVW4 592 aaPredicted RBP16.95■□□□□ 0.3
PTPN11-201ENST00000351677 ATXN7L3BQ96GX2 97 aa16.95■□□□□ 0.3
PTPN11-201ENST00000351677 TCP11X1B4DZS4 312 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 ATP5HO75947 161 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 HSPA9P38646 679 aaKnown RBP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 MDH1P40925 334 aaKnown RBP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 TRMT10CQ7L0Y3 403 aaKnown RBP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 RUBCNQ92622 972 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 DBR1Q9UK59 544 aaKnown RBP16.94■□□□□ 0.3
PTPN11-201ENST00000351677 PPME1Q9Y570 386 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 ORC6Q9Y5N6 252 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 USP32Q8NFA0 1604 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 PPFIA2O75334 1257 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 NCOA4Q13772 614 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 IFT43Q96FT9 208 aa16.94■□□□□ 0.3
PTPN11-201ENST00000351677 ELP3Q9H9T3 547 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms