RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 BTNL9Q6UXG8 535 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 ACAD11Q709F0 780 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 RAPH1Q70E73 1250 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 VPS52Q8N1B4 723 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 NUP93Q8N1F7 819 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 CRACR2BQ8N4Y2 399 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 GIMAP8Q8ND71 665 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 CDK5RAP3Q96JB5 506 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 ARMC7Q9H6L4 198 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 TRPC7Q9HCX4 862 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 CNOT7Q9UIV1 285 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 PITPNM2Q9BZ72 1349 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 E9PBE3 544 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 GYG2O15488 501 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 GPAA1O43292 621 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 FCER1AP12319 257 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 SCG2P13521 617 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 ANPEPP15144 967 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 STIP1P31948 543 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 TRPC1P48995 793 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 PPIDQ08752 370 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 STK4Q13043 487 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 MOGSQ13724 837 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 SLC18A3Q16572 532 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 TTC38Q5R3I4 469 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 MFSD5Q6N075 450 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 PEX26Q7Z412 305 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 BBS5Q8N3I7 341 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 LRRC57Q8N9N7 239 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 PLVAPQ9BX97 442 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 RABL2AQ9UBK7 228 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 WDR19Q8NEZ3 1342 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 KIAA0391O15091 583 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 CCNE1P24864 410 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 MCM7P33993 719 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 RPL21P46778 160 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 ITGA9Q13797 1035 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 LPIN1Q14693 890 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 KIAA1755Q5JYT7 1200 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 PACS1Q6VY07 963 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 C3orf62Q6ZUJ4 267 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 CCDC125Q86Z20 511 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 RAVER1Q8IY67 606 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 SRRM1Q8IYB3 904 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 ARHGAP24Q8N264 748 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 ZFP28Q8NHY6 868 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 SREK1Q8WXA9 508 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 GRAMD1AQ96CP6 724 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 PRICKLE1Q96MT3 831 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 BTBD10Q9BSF8 475 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 USP40Q9NVE5 1235 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 ARL8BQ9NVJ2 186 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 GRHL1Q9NZI5 618 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 CFAP69A5D8W1 941 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 DNAJC6O75061 913 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 DEXIO95424 95 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 SLC5A2P31639 672 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 RTN1Q16799 776 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 NADK2Q4G0N4 442 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 NAALADL2Q58DX5 795 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 PAOXQ6QHF9 649 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 RASSF3Q86WH2 238 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 JAMLQ86YT9 394 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 SH3RF3Q8TEJ3 882 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-203ENST00000349748 TMEM109Q9BVC6 243 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 TANGO6Q9C0B7 1094 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 UBN1Q9NPG3 1134 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 ARMCX3Q9UH62 379 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-203ENST00000349748 HBS1LQ9Y450 684 aaKnown RBP11.33□□□□□ -0.6
CAPN3-203ENST00000349748 NOX1Q9Y5S8 564 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 IVNS1ABPQ9Y6Y0 642 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 SERPING1P05155 500 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 CRABP2P29373 138 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 STT3AP46977 705 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 PFKPQ01813 784 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 CD300CQ08708 224 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 NSUN2Q08J23 767 aaKnown RBP eCLIP11.33□□□□□ -0.6
CAPN3-203ENST00000349748 DLG1Q12959 904 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 CTC1Q2NKJ3 1217 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 ANKDD1AQ495B1 522 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 METTL21CQ5VZV1 264 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 NEPROQ6NW34 567 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 CLNKQ7Z7G1 428 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 SAMD3Q8N6K7 520 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 MAML3Q96JK9 1138 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 CEP295NLQ96MC4 621 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 MKNK1Q9BUB5 465 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 NUP85Q9BW27 656 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 GRIP2Q9C0E4 1043 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 NKIRAS1Q9NYS0 192 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 ANGPTL2Q9UKU9 493 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 PPM1HQ9ULR3 514 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 TRAF3IP3Q9Y228 551 aa11.33□□□□□ -0.6
CAPN3-203ENST00000349748 ECM29Q5VYK3 1845 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 TXNDC9O14530 226 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 PLSCR1O15162 318 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms