RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 NUP93Q8N1F7 819 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 ZNF786Q8N393 782 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 STKLD1Q8NE28 680 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 HEXIM2Q96MH2 286 aaKnown RBP8.78□□□□□ -1
MCPH1-201ENST00000344683 RBBP8Q99708 897 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 PRRG3Q9BZD7 231 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 CLEC11AQ9Y240 323 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 YTHDC2Q9H6S0 1430 aaKnown RBP8.78□□□□□ -1
MCPH1-201ENST00000344683 DENND4BO75064 1496 aaPredicted RBP8.78□□□□□ -1
MCPH1-201ENST00000344683 ABCB1P08183 1280 aaPredicted RBP8.78□□□□□ -1
MCPH1-201ENST00000344683 KCNA2P16389 499 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 TAF2Q6P1X5 1199 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 DCAF5Q96JK2 942 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 CDHR1Q96JP9 859 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 EGFL8Q99944 293 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 ZNF577Q9BSK1 485 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 NUP85Q9BW27 656 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 CAAP1Q9H8G2 361 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 SAMSN1Q9NSI8 373 aaKnown RBP8.78□□□□□ -1
MCPH1-201ENST00000344683 CACNA2D2Q9NY47 1150 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 RCOR1Q9UKL0 485 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 FAM170AA1A519 330 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 LGALS16A8MUM7 142 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 IGF2BP3O00425 579 aaKnown RBP eCLIP8.78□□□□□ -1
MCPH1-201ENST00000344683 NCAPHQ15003 741 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 RWDD4Q6NW29 188 aaKnown RBP8.78□□□□□ -1
MCPH1-201ENST00000344683 LCORLQ8N3X6 602 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 PNMA1Q8ND90 353 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 SH3TC2Q8TF17 1288 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 SPATA17Q96L03 361 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 HDHD2Q9H0R4 259 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 KIAA1586Q9HCI6 787 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 HMG20AQ9NP66 347 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 INPP5FQ9Y2H2 1132 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 DTNAQ9Y4J8 743 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 ACEP12821 1306 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 ZNF197O14709 1029 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 FAM200BP0CF97 657 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 MYL2P10916 166 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 PIK3R1P27986 724 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 COPB2P35606 906 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 NT5C2P49902 561 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 GPATCH4Q5T3I0 446 aaKnown RBP8.78□□□□□ -1
MCPH1-201ENST00000344683 SLC7A3Q8WY07 619 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 SERHL2Q9H4I8 314 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 TRIM39Q9HCM9 518 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 SERHLQ9NQF3 203 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 CTNNAL1Q9UBT7 734 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 KLHL3Q9UH77 587 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 SRGAP2O75044 1071 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 MMP1P03956 469 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 WARSP23381 471 aaKnown RBP8.78□□□□□ -1
MCPH1-201ENST00000344683 SLC1A1P43005 524 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 COPAP53621 1224 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 NCKAP1LP55160 1127 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 GRM1Q13255 1194 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 R3HDM1Q15032 1099 aaKnown RBP8.78□□□□□ -1
MCPH1-201ENST00000344683 CCDC81Q6ZN84 652 aa8.78□□□□□ -1
MCPH1-201ENST00000344683 LRRC14Q15048 493 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 C12orf60Q5U649 245 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 CPXCR1Q8N123 301 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 APPL2Q8NEU8 664 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 PPP1R14BQ96C90 147 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 MPP4Q96JB8 637 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 KIFC1Q9BW19 673 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 TRIM66O15016 1216 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 NCALDP61601 193 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 PCNX4Q63HM2 1172 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 SMYD4Q8IYR2 804 aaPredicted RBP8.77□□□□□ -1
MCPH1-201ENST00000344683 SUPT20HQ8NEM7 779 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 ENKURQ8TC29 256 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 UNC45AQ9H3U1 944 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 TUFT1Q9NNX1 390 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 EMILIN3Q9NT22 766 aa8.77□□□□□ -1
MCPH1-201ENST00000344683 UBN2Q6ZU65 1347 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 SPDYE5A6NIY4 337 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 BTBD18B2RXH4 712 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 ADARP55265 1226 aaKnown RBP8.77□□□□□ -1.01
MCPH1-201ENST00000344683 SPDYE7PQ495Y7 208 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 RSBN1Q5VWQ0 802 aaPredicted RBP8.77□□□□□ -1.01
MCPH1-201ENST00000344683 LPCAT2Q7L5N7 544 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 IFNL3Q8IZI9 196 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 TTC39CQ8N584 583 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 ZNF579Q8NAF0 562 aaKnown RBP8.77□□□□□ -1.01
MCPH1-201ENST00000344683 RIN3Q8TB24 985 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 TGFBRAP1Q8WUH2 860 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 FOPNLQ96NB1 174 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 RPF1Q9H9Y2 349 aaKnown RBP8.77□□□□□ -1.01
MCPH1-201ENST00000344683 STK39Q9UEW8 545 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 hCG_1642624A0A1W2PR95 340 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 TRPC5OSA6NMA1 111 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 F8VZ95 297 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 RIMBP2O15034 1052 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 UFL1O94874 794 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 C21orf59P57076 290 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 TUBA4AP68366 448 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 UGP2Q16851 508 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 PAGE5Q96GU1 130 aa8.77□□□□□ -1.01
MCPH1-201ENST00000344683 REXO4Q9GZR2 422 aaKnown RBP8.77□□□□□ -1.01
MCPH1-201ENST00000344683 FKBP14Q9NWM8 211 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms