RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 WARS2Q9UGM6 360 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PCDHB4Q9Y5E5 795 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CDHR2Q9BYE9 1310 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SFI1A8K8P3 1242 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CSPG5O95196 566 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 MYL4P12829 197 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 GARTP22102 1010 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 HOXA10P31260 410 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 MDM2Q00987 491 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 FAM122CQ6P4D5 195 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TRPV6Q9H1D0 765 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PLEKHA5Q9HAU0 1116 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 FAM32AQ9Y421 112 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 COL17A1Q9UMD9 1497 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 NAIPQ13075 1403 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PLEKHG1Q9ULL1 1385 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PEX1O43933 1283 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PPP3CCP48454 512 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ITGA1P56199 1179 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 OCLNQ16625 522 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CEP95Q96GE4 821 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 BEGAINQ9BUH8 593 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 C9orf78Q9NZ63 289 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 A0A0G2JPF8 293 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 HNRNPCL3B7ZW38 293 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 HNRNPCL4P0DMR1 293 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PDE6AP16499 860 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 UBE3AQ05086 875 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 MDH1BQ5I0G3 518 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CASKIN1Q8WXD9 1431 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 FAM172BPA6NC97 362 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TBC1D4O60343 1298 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CALML3P27482 149 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 GPC3P51654 580 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 RAD23BP54727 409 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 HYIQ5T013 277 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 C6orf89Q6UWU4 347 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PRUNE1Q86TP1 453 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ATXN2LQ8WWM7 1075 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 BORCS5Q969J3 196 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 LOC100653049A0A140TA62 436 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SMCO2A6NFE2 343 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 KRT34O76011 436 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 OCM2P0CE71 109 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 OCMP0CE72 109 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PSMC3P17980 439 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 NAT1P18440 290 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PIK3CBP42338 1070 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 GIMAP6Q6P9H5 292 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CAND1Q86VP6 1230 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 IGSF22Q8N9C0 903 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 KCNV2Q8TDN2 545 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PUS3Q9BZE2 481 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TBC1D14Q9P2M4 693 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PLB1Q6P1J6 1458 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 HOXD12P35452 270 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 MSH2P43246 934 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 STARP49675 285 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ETV1P50549 477 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TDGQ13569 410 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 LIMS2Q7Z4I7 341 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 YTHDF1Q9BYJ9 559 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 RIC8AQ9NPQ8 531 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TAS2R1Q9NYW7 299 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 FAM153AQ9UHL3 310 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CALB1P05937 261 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 FCGR1AP12314 374 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 AAGABQ6PD74 315 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 STRA8Q7Z7C7 330 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ATP6V0D2Q8N8Y2 350 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 MCOLN3Q8TDD5 553 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CNDP2Q96KP4 475 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ATP6V1G3Q96LB4 118 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF597Q96LX8 424 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 EVLQ9UI08 416 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 JRKO75564 520 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 HOXD10P28358 340 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PDE4BQ07343 736 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TIMM50Q3ZCQ8 353 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SLC26A7Q8TE54 656 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 RBBP8Q99708 897 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PACSIN1Q9BY11 444 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 RHBDL2Q9NX52 303 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 IGSF9Q9P2J2 1179 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 NUMBLQ9Y6R0 609 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SYNGAP1Q96PV0 1343 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 SRGAP2CP0DJJ0 459 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 HADHQ16836 314 aaKnown RBP3.96□□□□□ -1.77
SYNE2-202ENST00000344113 ERI1Q8IV48 349 aaKnown RBP3.96□□□□□ -1.77
SYNE2-202ENST00000344113 CSNK1G3Q9Y6M4 447 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 WDR7Q9Y4E6 1490 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 CTNND1O60716 968 aaKnown RBP3.96□□□□□ -1.77
SYNE2-202ENST00000344113 ITGAXP20702 1163 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 CSTF3Q12996 717 aaKnown RBP3.96□□□□□ -1.77
SYNE2-202ENST00000344113 ZFP1Q6P2D0 407 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 CCNI2Q6ZMN8 369 aaPredicted RBP3.96□□□□□ -1.77
SYNE2-202ENST00000344113 DACT1Q9NYF0 836 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 SBNO2Q9Y2G9 1366 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 A0A088AWK7 358 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 TRIM75PA6NK02 468 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms