RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 MORC4Q8TE76 937 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 DDX50Q9BQ39 737 aaKnown RBP19.74■□□□□ 0.75
SMPD1-201ENST00000342245 CYLDQ9NQC7 956 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 METTL5Q9NRN9 209 aaKnown RBP19.74■□□□□ 0.75
SMPD1-201ENST00000342245 SENP1Q9P0U3 644 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 NAALADL1Q9UQQ1 740 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 CCNT1O60563 726 aaKnown RBP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 GAS8O95995 478 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 RASGRF1Q13972 1273 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 LRRC41Q15345 812 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 KYNUQ16719 465 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 TMEM266Q2M3C6 531 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 CFAP157Q5JU67 520 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 FAM26FQ5R3K3 315 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 C6orf163Q5TEZ5 329 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 C11orf63Q6NUN7 778 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 SYDE1Q6ZW31 735 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 RHOT2Q8IXI1 618 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 KBTBD2Q8IY47 623 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 CCDC85AQ96PX6 553 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 FNBP1Q96RU3 617 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 ZDHHC7Q9NXF8 308 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 DDX25Q9UHL0 483 aaKnown RBP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 ZNF148Q9UQR1 794 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 VEGFAP15692 232 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 CD97P48960 835 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 NT5C2P49902 561 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 RAP1GDS1P52306 607 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 COASYQ13057 564 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 GRM2Q14416 872 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 NONOQ15233 471 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 KCTD19Q17RG1 926 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 TTC27Q6P3X3 843 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 IZUMO2Q6UXV1 221 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 B3GNT6Q6ZMB0 384 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 MIGA2Q7L4E1 593 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 PTCD3Q96EY7 689 aaKnown RBP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 OSGEPQ9NPF4 335 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 BMP2KQ9NSY1 1161 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-201ENST00000342245 HDAC9Q9UKV0 1011 aa19.73■□□□□ 0.75
SMPD1-201ENST00000342245 FRMPD4Q14CM0 1322 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 THAP12O43422 761 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 HAUS5O94927 633 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 ETS2P15036 469 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 PON1P27169 355 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 STAT1P42224 750 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 SERPINB8P50452 374 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 FXR2P51116 673 aaKnown RBP eCLIP19.72■□□□□ 0.75
SMPD1-201ENST00000342245 ADARP55265 1226 aaKnown RBP19.72■□□□□ 0.75
SMPD1-201ENST00000342245 AP2B1P63010 937 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 ZNF211Q13398 564 aaPredicted RBP19.72■□□□□ 0.75
SMPD1-201ENST00000342245 KBTBD12Q3ZCT8 623 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 NCCRP1Q6ZVX7 275 aaPredicted RBP19.72■□□□□ 0.75
SMPD1-201ENST00000342245 CCDC80Q76M96 950 aa19.72■□□□□ 0.75
SMPD1-201ENST00000342245 RBM46Q8TBY0 533 aaKnown RBP19.72■□□□□ 0.75
SMPD1-201ENST00000342245 GPKOWQ92917 476 aaPredicted RBP eCLIP19.72■□□□□ 0.75
SMPD1-201ENST00000342245 MAGEB6P1A0A0J9YX57 407 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 RASA4BC9J798 803 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 RASA4O43374 803 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 KRT72Q14CN4 511 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 NEK8Q86SG6 692 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 PDCD7Q8N8D1 485 aaKnown RBP19.71■□□□□ 0.75
SMPD1-201ENST00000342245 DTX3LQ8TDB6 740 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 DENND1AQ8TEH3 1009 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 DYDC2Q96IM9 177 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 TTC25Q96NG3 672 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 PNMA5Q96PV4 448 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 TSPAN18Q96SJ8 248 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 MPHOSPH6Q99547 160 aaKnown RBP19.71■□□□□ 0.75
SMPD1-201ENST00000342245 BARHL2Q9NY43 387 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 SUN2Q9UH99 717 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-201ENST00000342245 BCRP11274 1271 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 XIAPP98170 497 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 BTG3Q14201 252 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-201ENST00000342245 CERKLQ49MI3 558 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-201ENST00000342245 RHBDF2Q6PJF5 856 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 MAP7D3Q8IWC1 876 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 DIS3LQ8TF46 1054 aaKnown RBP19.71■□□□□ 0.75
SMPD1-201ENST00000342245 AAASQ9NRG9 546 aa19.71■□□□□ 0.75
SMPD1-201ENST00000342245 BIN2Q9UBW5 565 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-201ENST00000342245 MAGEC1O60732 1142 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 ACTN1P12814 892 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 SLC9A1P19634 815 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 CLCN2P51788 898 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 NEK3P51956 506 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 TTLL12Q14166 644 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-201ENST00000342245 TCEAL1Q15170 157 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 ADRM1Q16186 407 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 LETM2Q2VYF4 491 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 P3H1Q32P28 736 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 HSP90AA5PQ58FG0 334 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 DNAJC14Q6Y2X3 702 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-201ENST00000342245 MTDHQ86UE4 582 aaKnown RBP19.7■□□□□ 0.74
SMPD1-201ENST00000342245 MIGA1Q8NAN2 632 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 ALG3Q92685 438 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 AGBL1Q96MI9 1066 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 NDE1Q9NXR1 346 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 OPHN1O60890 802 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms