RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 POLR3CQ9BUI4 534 aaPredicted RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 GDAQ9Y2T3 454 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 CACNA1FO60840 1977 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 GNGT2O14610 69 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 FTCDO95954 541 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 SUPT20HL2P0C7V6 817 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 GARTP22102 1010 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 YY1P25490 414 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ARHGDIAP52565 204 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 DYNLT1P63172 113 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ART3Q13508 389 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 DRAP1Q14919 205 aaPredicted RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 TMEM132DQ14C87 1099 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ZNF484Q5JVG2 852 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ICE2Q659A1 982 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 CDC42EP5Q6NZY7 148 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 PCSK9Q8NBP7 692 aaKnown RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ARRDC4Q8NCT1 418 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ULK4Q96C45 1275 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 PHF20Q9BVI0 1012 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 TRIM55Q9BYV6 548 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 MYOZ2Q9NPC6 264 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ADARB2Q9NS39 739 aaKnown RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ANGPTL2Q9UKU9 493 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 PRR12Q9ULL5 1215 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ITIH6Q6UXX5 1313 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 CCL15-CCL14A0A0B4J2E2 113 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 MYCP01106 439 aaPredicted RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 CDC25AP30304 524 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 PRCPP42785 496 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 CLNS1AP54105 237 aaKnown RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 MKRN3Q13064 507 aaKnown RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 BAATQ14032 418 aaPredicted RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 PIGHQ14442 188 aaPredicted RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 CCL15Q16663 113 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 SLC44A5Q8NCS7 719 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 SCFD1Q8WVM8 642 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 GRAMD1AQ96CP6 724 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 TSPAN17Q96FV3 270 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 GDAP1L1Q96MZ0 367 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 GPR101Q96P66 508 aaPredicted RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 MXRA8Q9BRK3 442 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 MOV10L1Q9BXT6 1211 aaKnown RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 STK33Q9BYT3 514 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 TRIM9Q9C026 710 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ELP3Q9H9T3 547 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 FAM217BQ9NTX9 383 aaPredicted RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 GGA3Q9NZ52 723 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 CPSF2Q9P2I0 782 aaKnown RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 VPS9D1Q9Y2B5 631 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ADAMTS13Q76LX8 1427 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 RHOBTB3O94955 611 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 HSPA4LO95757 839 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 APOA4P06727 396 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 KRT16P08779 473 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 RPA1P27694 616 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 FXR2P51116 673 aaKnown RBP eCLIP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 ROR1Q01973 937 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 PTK2BQ14289 1009 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 CAPN12Q6ZSI9 719 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 SRLQ86TD4 932 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 FAM83AQ86UY5 434 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 GRAMD1CQ8IYS0 662 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 AFG1LQ8WV93 481 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 C18orf8Q96DM3 657 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.17□□□□□ -1.15e-7■■■□□ 17.9
ATP2B4-201ENST00000341360 C11orf70Q9BRQ4 267 aa8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 FRMD8P1Q9BZ68 369 aaPredicted RBP8.17□□□□□ -1.1
ATP2B4-201ENST00000341360 POTEFA5A3E0 1075 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 KCNQ2O43526 872 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 POTEIP0CG38 1075 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 PLA2G4AP47712 749 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 FKBP1AP62942 108 aaKnown RBP8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 PRAMEP78395 509 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 PHEXP78562 749 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 ELAVL2Q12926 359 aaKnown RBP8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 SNX1Q13596 522 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 FAM102AQ5T9C2 384 aaPredicted RBP8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 NOTUMQ6P988 496 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 POTEGQ6S5H5 508 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 POTEEQ6S8J3 1075 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 RCOR2Q8IZ40 523 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 HSPH1Q92598 858 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 AIFM3Q96NN9 605 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 EIF2AQ9BY44 585 aaKnown RBP8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 ABCB6Q9NP58 842 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 IRAK4Q9NWZ3 460 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 LIMA1Q9UHB6 759 aaKnown RBP8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 POLIQ9UNA4 740 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 PIN4Q9Y237 131 aaKnown RBP8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 TARSL2A2RTX5 802 aaKnown RBP8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 TTC36A6NLP5 189 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 CLTAP09496 248 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 ITGA4P13612 1032 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 BFSP2Q13515 415 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 MTFR1Q15390 333 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 MSL3Q8N5Y2 521 aaKnown RBP8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 CALML6Q8TD86 181 aa8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 ZFP91Q96JP5 570 aaPredicted RBP8.16□□□□□ -1.1
ATP2B4-201ENST00000341360 FGD4Q96M96 766 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms