RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ZMYND10O75800 440 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 OAS1P00973 400 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 FYNP06241 537 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 PHKA2P46019 1235 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 COPB1P53618 953 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 YARSP54577 528 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 FLIIQ13045 1269 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 KLHL38Q2WGJ6 581 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 C10orf76Q5T2E6 689 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 SLX4IPQ5VYV7 408 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 RBM44Q6ZP01 1051 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 TMC7Q7Z402 723 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 HEATR3Q7Z4Q2 680 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 GPBP1Q86WP2 473 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 TRIM59Q8IWR1 403 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 ENKURQ8TC29 256 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 SAMD11Q96NU1 681 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 BTBD10Q9BSF8 475 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 MAGEE1Q9HCI5 957 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 EPB41L4AQ9HCS5 686 aaPredicted RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 XAB2Q9HCS7 855 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 ECHDC1Q9NTX5 307 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 MRPL39Q9NYK5 338 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 SENP1Q9P0U3 644 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 UBA2Q9UBT2 640 aaPredicted RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 TMEM5Q9Y2B1 443 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 A0A1W2PP64 1363 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 H7C1D1 291 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ARHGEF15O94989 841 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 NT5DC1Q5TFE4 455 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ERAP2Q6P179 960 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 FAM173BQ6P4H8 233 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 SLC30A10Q6XR72 485 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 C3orf67Q6ZVT6 689 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 CYP4V2Q6ZWL3 525 aaPredicted RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 TRMT10CQ7L0Y3 403 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 RASSF3Q86WH2 238 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 DCP2Q8IU60 420 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 UNC45BQ8IWX7 931 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 SLC4A5Q9BY07 1137 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 IFIH1Q9BYX4 1025 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ZMYND12Q9H0C1 365 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 FAM96AQ9H5X1 160 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ABCF3Q9NUQ8 709 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 C9orf78Q9NZ63 289 aaPredicted RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 HSFX1Q9UBD0 423 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 SUCOQ9UBS9 1254 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 DMGDHQ9UI17 866 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 RAB26Q9ULW5 256 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 BCL9O00512 1426 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 C2orf81A6NN90 581 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 PGRMC1O00264 195 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 PDPK1O15530 556 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 NMT2O60551 498 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 SIN3BO75182 1162 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ZNF254O75437 659 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 DGKIO75912 1065 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 FAM58BPP0C7Q3 252 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 PABPC1P11940 636 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 C19orf57Q0VDD7 668 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 VWA3BQ502W6 1294 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 KRT77Q7Z794 578 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 CREG2Q8IUH2 290 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ZNF579Q8NAF0 562 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 CCDC127Q96BQ5 260 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 C7orf26Q96N11 449 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 UBN1Q9NPG3 1134 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 SNRKQ9NRH2 765 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 SYBUQ9NX95 663 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 HDAC9Q9UKV0 1011 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 CAPN9O14815 690 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ASNA1O43681 348 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ABL1P00519 1130 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 IFNA16P05015 189 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 GLI1P08151 1106 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 GAP43P17677 238 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 MAGEA1P43355 309 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ANGPTL8Q6UXH0 198 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 TMC5Q6UXY8 1006 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 AGMOQ6ZNB7 445 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ZNF589Q86UQ0 364 aaPredicted RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ANKMY2Q8IV38 441 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ELMOD1Q8N336 334 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ZFPM2Q8WW38 1151 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 SEPT8Q92599 483 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 LRRC59Q96AG4 307 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 UROC1Q96N76 676 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 PITPNM3Q9BZ71 974 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ZNF696Q9H7X3 374 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 SP140LQ9H930 580 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 MAP3K20Q9NYL2 800 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 RWDD2AQ9UIY3 292 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 DBNLQ9UJU6 430 aaKnown RBP4.39□□□□□ -1.71
NEDD4-201ENST00000338963 CAPN11Q9UMQ6 739 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 TBC1D30Q9Y2I9 924 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 AMOTL2Q9Y2J4 779 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 TIMM22Q9Y584 194 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 NOX1Q9Y5S8 564 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 HECW2Q9P2P5 1572 aa4.39□□□□□ -1.71
NEDD4-201ENST00000338963 ENC1O14682 589 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms