RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TTC38Q5R3I4 469 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 KIAA0319Q5VV43 1072 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 TAS1R1Q7RTX1 841 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 APBB1IPQ7Z5R6 666 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-202ENST00000337571 CDR2LQ86X02 465 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-202ENST00000337571 FBXO18Q8NFZ0 1043 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 STAMQ92783 540 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 PIDD1Q9HB75 910 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 MAN1C1Q9NR34 630 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.78□□□□□ -0.52
CAPN3-202ENST00000337571 MARCH5Q9NX47 278 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-202ENST00000337571 GTF3C3Q9Y5Q9 886 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 MYO10Q9HD67 2058 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 TECTAO75443 2155 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 BRD1O95696 1058 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 ASGR2P07307 311 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 CYP11B2P19099 503 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 CCT6AP40227 531 aaKnown RBP11.77□□□□□ -0.53
CAPN3-202ENST00000337571 EFNA5P52803 228 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 DSG1Q02413 1049 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 PDIA5Q14554 519 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 FAM187BQ17R55 369 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 PALB2Q86YC2 1186 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 NOSTRINQ8IVI9 506 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 FZD8Q9H461 694 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 PLEKHA4Q9H4M7 779 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 RXFP1Q9HBX9 757 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 LRWD1Q9UFC0 647 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 ADAM28Q9UKQ2 775 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 KIF3AQ9Y496 699 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
CAPN3-202ENST00000337571 MUC6Q6W4X9 2439 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 ACKR2O00590 384 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 C1RP00736 705 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 PRKCBP05771 671 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 THP07101 528 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 SPATA31D3P0C874 917 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 MYBP10242 640 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 GBP2P32456 591 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-202ENST00000337571 NAMPTP43490 491 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 TUSC3Q13454 348 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 TDGQ13569 410 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 HSP90AA2PQ14568 343 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-202ENST00000337571 CDCA2Q69YH5 1023 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-202ENST00000337571 FUT10Q6P4F1 479 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 SPATA31D4Q6ZUB0 917 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 GPR65Q8IYL9 337 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 PRSS33Q8NF86 280 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 CMASQ8NFW8 434 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-202ENST00000337571 RIN2Q8WYP3 895 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-202ENST00000337571 RABGGTAQ92696 567 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 KIFAP3Q92845 792 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 CHST7Q9NS84 486 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 SNTG2Q9NY99 539 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 KIAA1024Q9UPX6 916 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 DNM3Q9UQ16 869 aa11.76□□□□□ -0.53
CAPN3-202ENST00000337571 SF3B1O75533 1304 aaKnown RBP eCLIP11.76□□□□□ -0.53
CAPN3-202ENST00000337571 K7ERI5 159 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 VCPP55072 806 aaKnown RBP11.75□□□□□ -0.53
CAPN3-202ENST00000337571 ST3GAL1Q11201 340 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 ELAVL2Q12926 359 aaKnown RBP11.75□□□□□ -0.53
CAPN3-202ENST00000337571 PDXDC1Q6P996 788 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 CEP57Q86XR8 500 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 GLYCTKQ8IVS8 523 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 RNF168Q8IYW5 571 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-202ENST00000337571 GSTCDQ8NEC7 633 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 SMG7Q92540 1137 aaKnown RBP11.75□□□□□ -0.53
CAPN3-202ENST00000337571 ATOH1Q92858 354 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-202ENST00000337571 B3GALT6Q96L58 329 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 MFRPQ9BY79 579 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 GPR62Q9BZJ7 368 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 BHMT2Q9H2M3 363 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 PDZD7Q9H5P4 517 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 DDX19AQ9NUU7 478 aaKnown RBP11.75□□□□□ -0.53
CAPN3-202ENST00000337571 FNIP2Q9P278 1114 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 IGSF9Q9P2J2 1179 aa11.75□□□□□ -0.53
CAPN3-202ENST00000337571 MTCL1Q9Y4B5 1905 aaKnown RBP11.74□□□□□ -0.53
CAPN3-202ENST00000337571 F8W810 466 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 LAD1O00515 517 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 TGM5O43548 720 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 EFEMP2O95967 443 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 PDGFBP01127 241 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-202ENST00000337571 U2AF2P26368 475 aaKnown RBP eCLIP11.74□□□□□ -0.53
CAPN3-202ENST00000337571 PTGDRQ13258 359 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 DCAF4L1Q3SXM0 396 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 FAM171A1Q5VUB5 890 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 KRT79Q5XKE5 535 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 MCTP1Q6DN14 999 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 DTHD1Q6ZMT9 781 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 SNX29Q8TEQ0 813 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 BSNDQ8WZ55 320 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 TTPALQ9BTX7 342 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 SMOC2Q9H3U7 446 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 KCNK12Q9HB15 430 aa11.74□□□□□ -0.53
CAPN3-202ENST00000337571 WDR6Q9NNW5 1121 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms