RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 DDX3YO15523 660 aaKnown RBP24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 SART1O43290 800 aaKnown RBP24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 TUBBP07437 444 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 CRELD2Q6UXH1 353 aaPredicted RBP24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 ZBTB33Q86T24 672 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 NEUROG2Q9H2A3 272 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 ALG6Q9Y672 507 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 UMODL1Q5DID0 1318 aa24.9■■□□□ 1.58
CLPTM1-201ENST00000337392 NCANO14594 1321 aa24.89■■□□□ 1.58
CLPTM1-201ENST00000337392 CSDE1O75534 798 aaKnown RBP24.89■■□□□ 1.58
CLPTM1-201ENST00000337392 TNFSF9P41273 254 aa24.89■■□□□ 1.58
CLPTM1-201ENST00000337392 IFI16Q16666 785 aaKnown RBP24.89■■□□□ 1.58
CLPTM1-201ENST00000337392 C9orf131Q5VYM1 1079 aa24.89■■□□□ 1.58
CLPTM1-201ENST00000337392 RIOX2Q8IUF8 465 aa24.89■■□□□ 1.58
CLPTM1-201ENST00000337392 SHC3Q92529 594 aa24.89■■□□□ 1.58
CLPTM1-201ENST00000337392 FGD4Q96M96 766 aa24.89■■□□□ 1.58
CLPTM1-201ENST00000337392 PDGFCQ9NRA1 345 aa24.89■■□□□ 1.58
CLPTM1-201ENST00000337392 PGRMC1O00264 195 aaKnown RBP24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 SRGAP2CP0DJJ0 459 aa24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 CYP2C8P10632 490 aa24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 MCM3P25205 808 aa24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 CYP2C19P33261 490 aa24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 BIRC3Q13489 604 aa24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 TDRD10Q5VZ19 366 aaKnown RBP24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 DEPTORQ8TB45 409 aa24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 SLC7A3Q8WY07 619 aa24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 CEP89Q96ST8 783 aa24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 DHX33Q9H6R0 707 aaKnown RBP24.89■■□□□ 1.57
CLPTM1-201ENST00000337392 A0A0A6YYK5 440 aaPredicted RBP24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 K7ERI5 159 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 CAPSQ13938 189 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 EAPPQ56P03 285 aaPredicted RBP24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 BRDTQ58F21 947 aaPredicted RBP24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 DNAJC21Q5F1R6 531 aaKnown RBP24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 OR5B17Q8NGF7 314 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 CDCA5Q96FF9 252 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 NT5C1BQ96P26 610 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.88■■□□□ 1.572e-9■□□□□ 8.2
CLPTM1-201ENST00000337392 PORCNQ9H237 461 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 RBPJLQ9UBG7 517 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 AGO2Q9UKV8 859 aaKnown RBP24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 GOLGA6BA6NDN3 693 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 TTI1O43156 1089 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 STAT5BP51692 787 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 PASD1Q8IV76 773 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 DNERQ8NFT8 737 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 SCFD2Q8WU76 684 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 FAM212AQ96EL1 285 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 GDF3Q9NR23 364 aa24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 SUCLA2Q9P2R7 463 aaPredicted RBP24.88■■□□□ 1.57
CLPTM1-201ENST00000337392 ZNF233A6NK53 670 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 ATG7O95352 703 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 KRT14P02533 472 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 GPS2Q13227 327 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 GLG1Q92896 1179 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 TRIM51Q9BSJ1 452 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 ZNF408Q9H9D4 720 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 P4HA2O15460 535 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 NF2P35240 595 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 FLT3P36888 993 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 GPC3P51654 580 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 MFAP3P55082 362 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 HLTFQ14527 1009 aaKnown RBP eCLIP24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 SKIDA1Q1XH10 827 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 PRPF31Q8WWY3 499 aaKnown RBP24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 CPA5Q8WXQ8 436 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 UPF1Q92900 1129 aaKnown RBP eCLIP24.87■■□□□ 1.575e-12■■■■■ 62.3
CLPTM1-201ENST00000337392 INTUQ9ULD6 942 aa24.87■■□□□ 1.57
CLPTM1-201ENST00000337392 A0A0G2JLL6 359 aaPredicted RBP24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 CCDC172P0C7W6 258 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 STRN3Q13033 797 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 PRRT2Q7Z6L0 340 aaPredicted RBP24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 OPTNQ96CV9 577 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 RNPC3Q96LT9 517 aaKnown RBP24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 ISCUQ9H1K1 167 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 DPH5Q9H2P9 285 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 SOCS7O14512 581 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 ANXA13P27216 316 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 OSTNP61366 133 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 ACTRT1Q8TDG2 376 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 TMEM174Q8WUU8 243 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 FNBP1Q96RU3 617 aa24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 APOBEC3GQ9HC16 384 aaKnown RBP24.86■■□□□ 1.57
CLPTM1-201ENST00000337392 TCRBV7S2A1N4TA0A589 114 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 VNN1O95497 513 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 POTEJP0CG39 1038 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 COMTP21964 271 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 ICAM3P32942 547 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 EPHB4P54760 987 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 KCTD16Q68DU8 428 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 TTC19Q6DKK2 380 aaPredicted RBP24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 ZDHHC14Q8IZN3 488 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 DDX1Q92499 740 aaKnown RBP24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 ARL8AQ96BM9 186 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 PBKQ96KB5 322 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 MSTO1Q9BUK6 570 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 RABEP2Q9H5N1 569 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 RNF14Q9UBS8 474 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 COQ4Q9Y3A0 265 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 HLA-DRAP01903 254 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms