RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 BMP6P22004 513 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 AKAP5P24588 427 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 NFKBIBQ15653 356 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 NFIL3Q16649 462 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 ZNF697Q5TEC3 545 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 CENPPQ6IPU0 288 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 SLC9A9Q8IVB4 645 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 CD302Q8IX05 232 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 SMYD4Q8IYR2 804 aaPredicted RBP16.77■□□□□ 0.27
SEC13-201ENST00000337354 MLKLQ8NB16 471 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 LPPQ93052 612 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 CASD1Q96PB1 797 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 TSPAN18Q96SJ8 248 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 MRPL9Q9BYD2 267 aaKnown RBP16.77■□□□□ 0.27
SEC13-201ENST00000337354 IKZF4Q9H2S9 585 aa16.77■□□□□ 0.27
SEC13-201ENST00000337354 RC3H2Q9HBD1 1191 aaKnown RBP16.77■□□□□ 0.27
SEC13-201ENST00000337354 EXTL3O43909 919 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 FAM189A1O60320 539 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 RECQL4O94761 1208 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 DNAJB2P25686 324 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 RPL13P26373 211 aaKnown RBP16.76■□□□□ 0.27
SEC13-201ENST00000337354 BTG3Q14201 252 aaPredicted RBP16.76■□□□□ 0.27
SEC13-201ENST00000337354 NOMO2Q5JPE7 1267 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
SEC13-201ENST00000337354 CLLU1OSQ5K130 101 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 FOXR2Q6PJQ5 311 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 Q7L0L9 218 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 GPD1LQ8N335 351 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 CEP120Q8N960 986 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 URGCPQ8TCY9 931 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 SP7Q8TDD2 431 aaPredicted RBP16.76■□□□□ 0.27
SEC13-201ENST00000337354 CBWD1Q9BRT8 395 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 APOL6Q9BWW8 343 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 PBX4Q9BYU1 374 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 RNF19AQ9NV58 838 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 TMEM63CQ9P1W3 806 aa16.76■□□□□ 0.27
SEC13-201ENST00000337354 CPSF3Q9UKF6 684 aaKnown RBP16.76■□□□□ 0.27
SEC13-201ENST00000337354 LAMA3Q16787 3333 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 CARNS1A5YM72 827 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 ARL5CA6NH57 179 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 TBKBP1A7MCY6 615 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 MEIS3P2A8K0S8 358 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 PPP1R3GB7ZBB8 358 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 ADRB2P07550 413 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 RABGGTBP53611 331 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 NLRP12P59046 1061 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 OSTNP61366 133 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 LRRC63Q05C16 580 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 EDRF1Q3B7T1 1238 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 XKR4Q5GH76 650 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 GPR153Q6NV75 609 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 CAVIN1Q6NZI2 390 aaKnown RBP16.75■□□□□ 0.27
SEC13-201ENST00000337354 SASS6Q6UVJ0 657 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 ALKAL1Q6UXT8 129 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 FIBCD1Q8N539 461 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 DEFB123Q8N688 67 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 XXYLT1Q8NBI6 393 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 HELQQ8TDG4 1101 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 FBXL18Q96ME1 805 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 FAM161BQ96MY7 647 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 RPS6KC1Q96S38 1066 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 GAD1Q99259 594 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 TSG101Q99816 390 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 SEMA6BQ9H3T3 888 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
SEC13-201ENST00000337354 DMAC2Q9NW81 257 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 HSPBP1Q9NZL4 362 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 DACH1Q9UI36 760 aa16.75■□□□□ 0.27
SEC13-201ENST00000337354 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.75■□□□□ 0.27
SEC13-201ENST00000337354 BICDL2A1A5D9 508 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 ZNF233A6NK53 670 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 CLIC2O15247 247 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 CCNE1P24864 410 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 MLH1P40692 756 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 ACOT2P49753 483 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 SLC10A6Q3KNW5 377 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 ZCWPW2Q504Y3 356 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 CRELD2Q6UXH1 353 aaPredicted RBP16.74■□□□□ 0.27
SEC13-201ENST00000337354 LRRC43Q8N309 656 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 GSTCDQ8NEC7 633 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 P2RX5Q93086 422 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 FAM213AQ9BRX8 229 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 PCIF1Q9H4Z3 704 aa16.74■□□□□ 0.27
SEC13-201ENST00000337354 TTC26A0AVF1 554 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 EXOC3O60645 756 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 SLC34A2O95436 690 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 NR3C1P04150 777 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 THP07101 528 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 KCNE1P15382 129 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
SEC13-201ENST00000337354 PBX2P40425 430 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 TNFSF9P41273 254 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 GATMP50440 423 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 FKBP3Q00688 224 aaKnown RBP16.73■□□□□ 0.27
SEC13-201ENST00000337354 ADAM9Q13443 819 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 SEZ6Q53EL9 994 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 TMEM192Q8IY95 271 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 SNX27Q96L92 541 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 ASB7Q9H672 318 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms