RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PHKG1Q16816 387 aa12.97□□□□□ -0.33
FN1-202ENST00000336916 TADA1Q96BN2 335 aa12.97□□□□□ -0.33
FN1-202ENST00000336916 COG4Q9H9E3 785 aa12.97□□□□□ -0.33
FN1-202ENST00000336916 NBPF26B4DH59 902 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 FGGP02679 453 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 STAT5BP51692 787 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 IL1RL1Q01638 556 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 RRM2BQ7LG56 351 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 SZRD1Q7Z422 152 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
FN1-202ENST00000336916 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 PRMT7Q9NVM4 692 aaPredicted RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 DSEQ9UL01 958 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 HEY1Q9Y5J3 304 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 CCDC22O60826 627 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 GARTP22102 1010 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 SERPINB4P48594 390 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 TMEM132BQ14DG7 1078 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 MMS22LQ6ZRQ5 1243 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 SRPK1Q96SB4 655 aaKnown RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 H7C4K7 107 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 PDXKO00764 312 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 E2F6O75461 281 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 SGSM1Q2NKQ1 1148 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 TRIM68Q6AZZ1 485 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 ZNF564Q8TBZ8 553 aaPredicted RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 SLIT1O75093 1534 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 CDH2P19022 906 aaPredicted RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 GTF2A2P52657 109 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 TPI1P60174 286 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 TMPRSS15P98073 1019 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 EPHA7Q15375 998 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 EFL1Q7Z2Z2 1120 aaKnown RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 TEKT4Q8WW24 435 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 NCLNQ969V3 563 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 C18orf8Q96DM3 657 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 FAM213AQ9BRX8 229 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 TDRD3Q9H7E2 651 aaKnown RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 ECT2Q9H8V3 914 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 XAB2Q9HCS7 855 aaKnown RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 KRT82Q9NSB4 513 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 SESN3P58005 492 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 FAM102AQ5T9C2 384 aaPredicted RBP12.96□□□□□ -0.33
FN1-202ENST00000336916 SWSAP1Q6NVH7 229 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 BANK1Q8NDB2 785 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 ING2Q9H160 280 aa12.96□□□□□ -0.33
FN1-202ENST00000336916 ZNF638Q14966 1978 aaKnown RBP12.96□□□□□ -0.34
FN1-202ENST00000336916 MFAP3LO75121 409 aa12.96□□□□□ -0.34
FN1-202ENST00000336916 RASIP1Q5U651 963 aa12.96□□□□□ -0.34
FN1-202ENST00000336916 RNF217Q8TC41 542 aa12.96□□□□□ -0.34
FN1-202ENST00000336916 ATP2C1P98194 919 aaPredicted RBP12.96□□□□□ -0.34
FN1-202ENST00000336916 ADCK5Q3MIX3 580 aa12.96□□□□□ -0.34
FN1-202ENST00000336916 AGBL3Q8NEM8 1001 aa12.96□□□□□ -0.34
FN1-202ENST00000336916 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.34
FN1-202ENST00000336916 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.34
FN1-202ENST00000336916 PSD3Q9NYI0 1048 aa12.96□□□□□ -0.34
FN1-202ENST00000336916 RASA4BC9J798 803 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 RASA4O43374 803 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 CD302Q8IX05 232 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 ARRDC4Q8NCT1 418 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 GPT2Q8TD30 523 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 CFAP69A5D8W1 941 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 GFAPP14136 432 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 GCLCP48506 637 aaPredicted RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 HDAC4P56524 1084 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 RCOR2Q8IZ40 523 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 TRIM4Q9C037 500 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 RAVER2Q9HCJ3 691 aaKnown RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 M0QYV0 167 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 RESTQ13127 1097 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 MTFR1Q15390 333 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 TSGA10IPQ3SY00 556 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 SBK1Q52WX2 424 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 TTC30AQ86WT1 665 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 FAM9CQ8IZT9 166 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 KLHL29Q96CT2 875 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 CCSER1Q9C0I3 900 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 PCDHB6Q9Y5E3 794 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 EEF1DP29692 281 aaKnown RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 HARS2P49590 506 aaKnown RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 ARHGEF7Q14155 803 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 TAF1CQ15572 869 aaPredicted RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 LINC00523Q86TU6 105 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.95□□□□□ -0.342e-44■■■■□ 22.2
FN1-202ENST00000336916 GOLPH3LQ9H4A5 285 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 MOSPD1Q9UJG1 213 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 DOLKQ9UPQ8 538 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 BAZ2AQ9UIF9 1905 aaKnown RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 FCGRTP55899 365 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 BBS9Q3SYG4 887 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 ST13P4Q8IZP2 240 aaPredicted RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 SLC26A7Q8TE54 656 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 UCMAQ8WVF2 138 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms