RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TMEM192Q8IY95 271 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 KRT35Q92764 455 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 INO80BQ9C086 356 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 RABEP2Q9H5N1 569 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 RBAKQ9NYW8 714 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 VPS18Q9P253 973 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 FAM153AQ9UHL3 310 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 RAB21Q9UL25 225 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 PCDHGC5Q9Y5F6 944 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 ZNF233A6NK53 670 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 HOXA7P31268 230 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 PIK3CAP42336 1068 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 PRAMEF19Q5SWL8 479 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 FAM182AQ5T1J6 154 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 TDRD10Q5VZ19 366 aaKnown RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 XRRA1Q6P2D8 792 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 FBXL13Q8NEE6 735 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 EPS8L1Q8TE68 723 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 SEPT1Q8WYJ6 367 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 ARHGAP28Q9P2N2 729 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 NFU1Q9UMS0 254 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 ADCYAP1R1P41586 468 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 ERVK-9P63128 1117 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 DNAJC21Q5F1R6 531 aaKnown RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 RNF10Q8N5U6 811 aaKnown RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 LRRC57Q8N9N7 239 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 DNERQ8NFT8 737 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 HELQQ8TDG4 1101 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 IWS1Q96ST2 819 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 SENP7Q9BQF6 1050 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 YY1AP1Q9H869 796 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 BZW2Q9Y6E2 419 aaKnown RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 MYH9P35579 1960 aaKnown RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 NFASCO94856 1347 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 ERLIN1O75477 346 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 HEXIM1O94992 359 aaKnown RBP13.55□□□□□ -0.24
LIMK1-201ENST00000336180 HLA-DRAP01903 254 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 CRELD2Q6UXH1 353 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-201ENST00000336180 KCTD17Q8N5Z5 321 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 NT5C1BQ96P26 610 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 DHX33Q9H6R0 707 aaKnown RBP13.55□□□□□ -0.24
LIMK1-201ENST00000336180 FAN1Q9Y2M0 1017 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 PDHXO00330 501 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 RAD51CO43502 376 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 NFIL3Q16649 462 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 SAMD3Q8N6K7 520 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 GPR20Q99678 358 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 SELENOOQ9BVL4 669 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 MINDY3Q9H8M7 445 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 LCTP09848 1927 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 SBF1O95248 1867 aa13.55□□□□□ -0.24
LIMK1-201ENST00000336180 CST3P01034 146 aaPredicted RBP13.54□□□□□ -0.24
LIMK1-201ENST00000336180 VTNP04004 478 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
LIMK1-201ENST00000336180 TUBB2AQ13885 445 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 ARMC9Q7Z3E5 817 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 FAM118BQ9BPY3 351 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 TUBB2BQ9BVA1 445 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 DPH5Q9H2P9 285 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 APOBEC3GQ9HC16 384 aaKnown RBP13.54□□□□□ -0.24
LIMK1-201ENST00000336180 TMEM8AQ9HCN3 771 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 AMACRQ9UHK6 382 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 NOC2LQ9Y3T9 749 aaKnown RBP13.54□□□□□ -0.24
LIMK1-201ENST00000336180 CCL15-CCL14A0A0B4J2E2 113 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 CYP11B1P15538 503 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 CCL15Q16663 113 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 EEF1DP3Q658K8 133 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 DPH6Q7L8W6 267 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 HDXQ7Z353 690 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 SPIRE2Q8WWL2 714 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 ALG3Q92685 438 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 MTMR12Q9C0I1 747 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 BTBD19C9JJ37 291 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 FGGP02679 453 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 ADORA2AP29274 412 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 TFAMQ00059 246 aaKnown RBP13.54□□□□□ -0.24
LIMK1-201ENST00000336180 FMO1Q01740 532 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 LAMTOR4Q0VGL1 99 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 ALCAMQ13740 583 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 DCAF12L1Q5VU92 463 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 TMEM270Q6UE05 265 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 METTL7BQ6UX53 244 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 CCNI2Q6ZMN8 369 aaPredicted RBP13.54□□□□□ -0.24
LIMK1-201ENST00000336180 NT5DC3Q86UY8 548 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 TSEN2Q8NCE0 465 aaKnown RBP13.54□□□□□ -0.24
LIMK1-201ENST00000336180 RDM1Q8NG50 284 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 ZNF653Q96CK0 615 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 NRBP2Q9NSY0 501 aa13.54□□□□□ -0.24
LIMK1-201ENST00000336180 HTTP42858 3142 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 NEDD9Q14511 834 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 HLTFQ14527 1009 aaKnown RBP eCLIP13.53□□□□□ -0.24
LIMK1-201ENST00000336180 ARMCX2Q7L311 632 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 AFG1LQ8WV93 481 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 CPB2Q96IY4 423 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 NTPCRQ9BSD7 190 aaKnown RBP13.53□□□□□ -0.24
LIMK1-201ENST00000336180 SYT11Q9BT88 431 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 KRIT1O00522 736 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms