RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ACAP3Q96P50 834 aa15.36■□□□□ 0.05
APOBEC3B-202ENST00000335760 FAM213AQ9BRX8 229 aa15.36■□□□□ 0.05
APOBEC3B-202ENST00000335760 RSAD1Q9HA92 442 aa15.36■□□□□ 0.05
APOBEC3B-202ENST00000335760 UBN1Q9NPG3 1134 aa15.36■□□□□ 0.05
APOBEC3B-202ENST00000335760 RNF19AQ9NV58 838 aa15.36■□□□□ 0.05
APOBEC3B-202ENST00000335760 KLK14Q9P0G3 267 aa15.36■□□□□ 0.05
APOBEC3B-202ENST00000335760 DACH1Q9UI36 760 aa15.36■□□□□ 0.05
APOBEC3B-202ENST00000335760 GIT1Q9Y2X7 761 aa15.36■□□□□ 0.05
APOBEC3B-202ENST00000335760 SYCE3A1L190 88 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 KIAA0391O15091 583 aaKnown RBP15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 HOXA2O43364 376 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 EXTL3O43909 919 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 DGKIO75912 1065 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 RECQL4O94761 1208 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 GJB5O95377 273 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 CLTAP09496 248 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 PMS1P54277 932 aaKnown RBP15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 YARSP54577 528 aaKnown RBP15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 STX17P56962 302 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 TYRO3Q06418 890 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 PAK1Q13153 545 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 STX1AQ16623 288 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 ZSCAN23Q3MJ62 389 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 ZCWPW2Q504Y3 356 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 CLLU1OSQ5K130 101 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 ABI1Q8IZP0 508 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 GPD1LQ8N335 351 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 HELQQ8TDG4 1101 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 ANO10Q9NW15 660 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 DMAC2Q9NW81 257 aa15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 CPSF3Q9UKF6 684 aaKnown RBP15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 COLQQ9Y215 455 aaPredicted RBP15.35■□□□□ 0.05
APOBEC3B-202ENST00000335760 TBKBP1A7MCY6 615 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 GRXCR1A8MXD5 290 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 EXOC3O60645 756 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 OFD1O75665 1012 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 CXCL8P10145 99 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 MLH1P40692 756 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 LRRC63Q05C16 580 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 MYBPC2Q14324 1141 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 NFIL3Q16649 462 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 EDRF1Q3B7T1 1238 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 FAM109BQ6ICB4 259 aaPredicted RBP15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 GLB1LQ6UWU2 654 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 CRELD2Q6UXH1 353 aaPredicted RBP15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 SLC9A9Q8IVB4 645 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 XXYLT1Q8NBI6 393 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 YME1L1Q96TA2 773 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 GAD1Q99259 594 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 RPF1Q9H9Y2 349 aaKnown RBP15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 INPP5FQ9Y2H2 1132 aa15.34■□□□□ 0.05
APOBEC3B-202ENST00000335760 BICDL2A1A5D9 508 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 ARL5CA6NH57 179 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 TULP1O00294 542 aaPredicted RBP15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 TLL1O43897 1013 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 CCDC192P0DO97 292 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 NR2F2P24468 414 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 RPL13P26373 211 aaKnown RBP15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 AFF1P51825 1210 aaKnown RBP15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 RABGGTBP53611 331 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 ADAM9Q13443 819 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 ENOX2Q16206 610 aaKnown RBP15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 SLC10A6Q3KNW5 377 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 PAN2Q504Q3 1202 aaKnown RBP15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 TTI2Q6NXR4 508 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 RDH13Q8NBN7 331 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 TMEM174Q8WUU8 243 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 ZNF689Q96CS4 500 aaPredicted RBP15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 FAM212AQ96EL1 285 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 ZFP42Q96MM3 310 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 CASD1Q96PB1 797 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 RPS6KC1Q96S38 1066 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 RAD9AQ99638 391 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 DUSP9Q99956 384 aaKnown RBP15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 TMEM117Q9H0C3 514 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 CXCL16Q9H2A7 254 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 KIAA1586Q9HCI6 787 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 RWDD2AQ9UIY3 292 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 INSL6Q9Y581 213 aa15.33■□□□□ 0.04
APOBEC3B-202ENST00000335760 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 ZNF233A6NK53 670 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 CETN3O15182 167 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 MEFVO15553 781 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 CASP4P49662 377 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 HTRA4P83105 476 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 HSP90AA2PQ14568 343 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 NOMO2Q5JPE7 1267 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 CT47A1Q5JQC4 288 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 CEP135Q66GS9 1140 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 CBWD2Q8IUF1 395 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 URGCPQ8TCY9 931 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 EEF2KMTQ96G04 330 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 SNX27Q96L92 541 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 FBXL18Q96ME1 805 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 PLEKHA5Q9HAU0 1116 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 MIOSQ9NXC5 875 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms