RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ZMYM2Q9UBW7 1377 aa16.39■□□□□ 0.21
KATNA1-201ENST00000335643 SPTLC2O15270 562 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 NCK2O43639 380 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 IGFBP6P24592 240 aaPredicted RBP16.38■□□□□ 0.21
KATNA1-201ENST00000335643 NDUFV1P49821 464 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 OSTNP61366 133 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 GRIK3Q13003 919 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 SMC1AQ14683 1233 aaKnown RBP16.38■□□□□ 0.21
KATNA1-201ENST00000335643 DCAF4L1Q3SXM0 396 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 ZNF568Q3ZCX4 644 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 PDE12Q6L8Q7 609 aaKnown RBP16.38■□□□□ 0.21
KATNA1-201ENST00000335643 PPP2R3CQ969Q6 453 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 HAPLN2Q9GZV7 340 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 CD320Q9NPF0 282 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 CTSAP10619 480 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 SEZ6Q53EL9 994 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 GLRA4Q5JXX5 417 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 LLGL2Q6P1M3 1020 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 DYMQ7RTS9 669 aa16.38■□□□□ 0.21
KATNA1-201ENST00000335643 RNF168Q8IYW5 571 aaPredicted RBP16.38■□□□□ 0.21
KATNA1-201ENST00000335643 LARSQ9P2J5 1176 aaKnown RBP16.38■□□□□ 0.21
KATNA1-201ENST00000335643 NCOR1O75376 2440 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 PDCD11Q14690 1871 aaKnown RBP16.37■□□□□ 0.21
KATNA1-201ENST00000335643 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.37■□□□□ 0.21
KATNA1-201ENST00000335643 CASTOR2A6NHX0 329 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 MYMKA6NI61 221 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 MBTPS2O43462 519 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 CLASP2O75122 1294 aaKnown RBP16.37■□□□□ 0.21
KATNA1-201ENST00000335643 PPP6R2O75170 966 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 YEATS4O95619 227 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 CXCL14O95715 111 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 NMT1P30419 496 aaKnown RBP16.37■□□□□ 0.21
KATNA1-201ENST00000335643 CA8P35219 290 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 AXDND1Q5T1B0 1012 aaPredicted RBP16.37■□□□□ 0.21
KATNA1-201ENST00000335643 RRAGBQ5VZM2 374 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 MPZL3Q6UWV2 235 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 HAUS6Q7Z4H7 955 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 MYCT1Q8N699 235 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 PDILTQ8N807 584 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 FEZF2Q8TBJ5 459 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 B3GALT6Q96L58 329 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 ZNF396Q96N95 335 aaPredicted RBP16.37■□□□□ 0.21
KATNA1-201ENST00000335643 RPS6KC1Q96S38 1066 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 PARVGQ9HBI0 331 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 STK17AQ9UEE5 414 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 CCDC39Q9UFE4 941 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 HCFC2Q9Y5Z7 792 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 CITO14578 2027 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 PLXNA3P51805 1871 aa16.37■□□□□ 0.21
KATNA1-201ENST00000335643 K7ENM7 598 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 LILRB3O75022 631 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 FAM13AO94988 1023 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 KRT18P05783 430 aaKnown RBP16.36■□□□□ 0.21
KATNA1-201ENST00000335643 HARSP12081 509 aaKnown RBP16.36■□□□□ 0.21
KATNA1-201ENST00000335643 GRM5P41594 1212 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 SMTNP53814 917 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 DNM1Q05193 864 aaKnown RBP16.36■□□□□ 0.21
KATNA1-201ENST00000335643 HASPINQ8TF76 798 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 DDX12PQ92771 950 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 DNAJC19Q96DA6 116 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 CDCA3Q99618 268 aaPredicted RBP16.36■□□□□ 0.21
KATNA1-201ENST00000335643 GPR62Q9BZJ7 368 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 IKZF4Q9H2S9 585 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 ZHX3Q9H4I2 956 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 ANKFY1Q9P2R3 1169 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 CD207Q9UJ71 328 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 CDH22Q9UJ99 828 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 IRAK3Q9Y616 596 aa16.36■□□□□ 0.21
KATNA1-201ENST00000335643 VWA8A3KMH1 1905 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 TNFRSF10AO00220 468 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 TRAK2O60296 914 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 KIF4AO95239 1232 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 BRD1O95696 1058 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 SOD2P04179 222 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 TXLNAP40222 546 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 SOX4Q06945 474 aaPredicted RBP16.35■□□□□ 0.21
KATNA1-201ENST00000335643 STRN3Q13033 797 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 COASYQ13057 564 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 TUSC3Q13454 348 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 ZC2HC1CQ53FD0 456 aaPredicted RBP16.35■□□□□ 0.21
KATNA1-201ENST00000335643 ALKAL1Q6UXT8 129 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 FAM178BQ8IXR5 827 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 TMEM130Q8N3G9 435 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 SMRP1Q8NCR6 262 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 KHSRPQ92945 711 aaKnown RBP eCLIP16.35■□□□□ 0.21
KATNA1-201ENST00000335643 KCNN1Q92952 543 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 ZMAT2Q96NC0 199 aaKnown RBP16.35■□□□□ 0.21
KATNA1-201ENST00000335643 PPP1R10Q96QC0 940 aaKnown RBP16.35■□□□□ 0.21
KATNA1-201ENST00000335643 GOLGA2P5Q9HBQ8 144 aa16.35■□□□□ 0.21
KATNA1-201ENST00000335643 CARNS1A5YM72 827 aa16.34■□□□□ 0.21
KATNA1-201ENST00000335643 C2CD2LO14523 706 aa16.34■□□□□ 0.21
KATNA1-201ENST00000335643 TBCAO75347 108 aaKnown RBP16.34■□□□□ 0.21
KATNA1-201ENST00000335643 TOM1L1O75674 476 aa16.34■□□□□ 0.21
KATNA1-201ENST00000335643 THP07101 528 aa16.34■□□□□ 0.21
KATNA1-201ENST00000335643 MCF2P10911 925 aa16.34■□□□□ 0.21
KATNA1-201ENST00000335643 STAT6P42226 847 aa16.34■□□□□ 0.21
KATNA1-201ENST00000335643 SMAD2Q15796 467 aaKnown RBP16.34■□□□□ 0.21
KATNA1-201ENST00000335643 E2F4Q16254 413 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms