RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 MYOZ2Q9NPC6 264 aa25.11■■□□□ 1.61
NDEL1-201ENST00000334527 PCDHA3Q9Y5H8 950 aa25.11■■□□□ 1.61
NDEL1-201ENST00000334527 FER1L6Q2WGJ9 1857 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 SLC39A4Q6P5W5 647 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 SLC13A5Q86YT5 568 aaPredicted RBP25.1■■□□□ 1.61
NDEL1-201ENST00000334527 DHX38Q92620 1227 aaKnown RBP25.1■■□□□ 1.61
NDEL1-201ENST00000334527 TLCD1Q96CP7 247 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 STK32BQ9NY57 414 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 UVRAGQ9P2Y5 699 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 MTUS1Q9ULD2 1270 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 ZBED4O75132 1171 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 MTMR2Q13614 643 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 TMC2Q8TDI7 906 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 POMGNT1Q8WZA1 660 aa25.1■■□□□ 1.61
NDEL1-201ENST00000334527 RNF25Q96BH1 459 aaPredicted RBP25.1■■□□□ 1.61
NDEL1-201ENST00000334527 MOV10L1Q9BXT6 1211 aaKnown RBP25.1■■□□□ 1.61
NDEL1-201ENST00000334527 ZNFX1Q9P2E3 1918 aaKnown RBP25.1■■□□□ 1.61
NDEL1-201ENST00000334527 GBP1P32455 592 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 CCDC105Q8IYK2 499 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 KIFAP3Q92845 792 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 CEP170P1Q96L14 293 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 MFSD14AQ96MC6 490 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 RPAP3Q9H6T3 665 aaPredicted RBP25.09■■□□□ 1.61
NDEL1-201ENST00000334527 PAEPP09466 180 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 DLATP10515 647 aaKnown RBP25.09■■□□□ 1.61
NDEL1-201ENST00000334527 CYP24A1Q07973 514 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 CYP1B1Q16678 543 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 YTHDF3Q7Z739 585 aaKnown RBP25.09■■□□□ 1.61
NDEL1-201ENST00000334527 NLRX1Q86UT6 975 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 DDX1Q92499 740 aaKnown RBP25.09■■□□□ 1.61
NDEL1-201ENST00000334527 RAPGEF5Q92565 580 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 MTRF1LQ9UGC7 380 aaKnown RBP25.09■■□□□ 1.61
NDEL1-201ENST00000334527 PARP2Q9UGN5 583 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 PTPN22Q9Y2R2 807 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 PCDHA10Q9Y5I2 948 aa25.09■■□□□ 1.61
NDEL1-201ENST00000334527 COILP38432 576 aaPredicted RBP25.08■■□□□ 1.61
NDEL1-201ENST00000334527 RWDD2BP57060 319 aa25.08■■□□□ 1.61
NDEL1-201ENST00000334527 SV2AQ7L0J3 742 aa25.08■■□□□ 1.61
NDEL1-201ENST00000334527 TATDN2Q93075 761 aa25.08■■□□□ 1.61
NDEL1-201ENST00000334527 FBXL18Q96ME1 805 aa25.08■■□□□ 1.61
NDEL1-201ENST00000334527 TEPSINQ96N21 525 aa25.08■■□□□ 1.61
NDEL1-201ENST00000334527 GABBR1Q9UBS5 961 aa25.08■■□□□ 1.61
NDEL1-201ENST00000334527 RARAP10276 462 aa25.08■■□□□ 1.6
NDEL1-201ENST00000334527 KRT5P13647 590 aa25.08■■□□□ 1.6
NDEL1-201ENST00000334527 ACAD10Q6JQN1 1059 aa25.08■■□□□ 1.6
NDEL1-201ENST00000334527 OTUD6AQ7L8S5 288 aa25.08■■□□□ 1.6
NDEL1-201ENST00000334527 USP37Q86T82 979 aa25.08■■□□□ 1.6
NDEL1-201ENST00000334527 RDM1Q8NG50 284 aa25.08■■□□□ 1.6
NDEL1-201ENST00000334527 SPIRE2Q8WWL2 714 aa25.08■■□□□ 1.6
NDEL1-201ENST00000334527 GGA2Q9UJY4 613 aa25.08■■□□□ 1.6
NDEL1-201ENST00000334527 PNMA2Q9UL42 364 aa25.08■■□□□ 1.6
NDEL1-201ENST00000334527 DPEP1P16444 411 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 GTF2H1P32780 548 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 BAATQ14032 418 aaPredicted RBP25.07■■□□□ 1.6
NDEL1-201ENST00000334527 SLC29A2Q14542 456 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 RNF187Q5TA31 235 aaPredicted RBP25.07■■□□□ 1.6
NDEL1-201ENST00000334527 ZNF772Q68DY9 489 aaPredicted RBP25.07■■□□□ 1.6
NDEL1-201ENST00000334527 C3orf20Q8ND61 904 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 KAT2BQ92831 832 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 NTPCRQ9BSD7 190 aaKnown RBP25.07■■□□□ 1.6
NDEL1-201ENST00000334527 PDGFDQ9GZP0 370 aaPredicted RBP25.07■■□□□ 1.6
NDEL1-201ENST00000334527 CNOT10Q9H9A5 744 aaKnown RBP25.07■■□□□ 1.6
NDEL1-201ENST00000334527 KCNA3P22001 575 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 CCND2P30279 289 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 IFT88Q13099 833 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 SIX1Q15475 284 aaPredicted RBP25.07■■□□□ 1.6
NDEL1-201ENST00000334527 WNK4Q96J92 1243 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 PI4K2AQ9BTU6 479 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 SEMA4AQ9H3S1 761 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 RIPK3Q9Y572 518 aa25.07■■□□□ 1.6
NDEL1-201ENST00000334527 RGPD3A6NKT7 1758 aaPredicted RBP25.06■■□□□ 1.6
NDEL1-201ENST00000334527 RGPD4Q7Z3J3 1758 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 VWA5AO00534 786 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 HNRNPDLO14979 420 aaKnown RBP25.06■■□□□ 1.6
NDEL1-201ENST00000334527 ZNF862O60290 1169 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 GRIN3BO60391 1043 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 CALCAP01258 141 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 KCNJ1P48048 391 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 CDR1P51861 262 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 BYSLQ13895 437 aaKnown RBP25.06■■□□□ 1.6
NDEL1-201ENST00000334527 RUNDC3BQ96NL0 473 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 VPS33BQ9H267 617 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 C17orf75Q9HAS0 396 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 RNF146Q9NTX7 359 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 ADGRA3Q8IWK6 1321 aa25.06■■□□□ 1.6
NDEL1-201ENST00000334527 TLDC2A0PJX2 215 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 CTNND1O60716 968 aaKnown RBP25.05■■□□□ 1.6
NDEL1-201ENST00000334527 QPCTQ16769 361 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 CLEC16AQ2KHT3 1053 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 GPD1LQ8N335 351 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 MDM1Q8TC05 714 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 ATG4CQ96DT6 458 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 DDX20Q9UHI6 824 aaKnown RBP25.05■■□□□ 1.6
NDEL1-201ENST00000334527 PASKQ96RG2 1323 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 SMIM23A6NLE4 172 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 UBAP2Q5T6F2 1119 aaKnown RBP25.05■■□□□ 1.6
NDEL1-201ENST00000334527 VSIG10LQ86VR7 867 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 PGM2Q96G03 612 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 SENP7Q9BQF6 1050 aa25.05■■□□□ 1.6
NDEL1-201ENST00000334527 FAM213AQ9BRX8 229 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms