RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ANGPT2O15123 496 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ATP6V1B1P15313 513 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ARL4AP40617 200 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 LMBR1LQ6UX01 489 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 PCYOX1LQ8NBM8 494 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 GANCQ8TET4 914 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 CEP72Q9P209 647 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 SQORQ9Y6N5 450 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ADGRL3Q9HAR2 1447 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 KANSL1LA0AUZ9 987 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 MED26O95402 600 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 KRT31Q15323 416 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 FAM47CQ5HY64 1035 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 LINS1Q8NG48 757 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 FAF2Q96CS3 445 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 SLC39A2Q9NP94 309 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 MRPL39Q9NYK5 338 aaKnown RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ADAM30Q9UKF2 790 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 KLHL33A6NCF5 533 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 MAP3K13O43283 966 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 COBLO75128 1261 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 PRAMEP78395 509 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 BBS9Q3SYG4 887 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 TAS2R42Q7RTR8 314 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 C16orf62Q7Z3J2 963 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 KBTBD3Q8NAB2 608 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 EEF2KMTQ96G04 330 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 CASS4Q9NQ75 786 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 IARS2Q9NSE4 1012 aaKnown RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 H2AFY2Q9P0M6 372 aaPredicted RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 H2AFYO75367 372 aaKnown RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ADAM9Q13443 819 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 MYBPC2Q14324 1141 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 TCHHL1Q5QJ38 904 aaPredicted RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ARMCX5Q6P1M9 558 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 CNBD1Q8NA66 436 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 APPBP2Q92624 585 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ARL8AQ96BM9 186 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 SERPINB12Q96P63 405 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 EPC1Q9H2F5 836 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 GCNT4Q9P109 453 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 CDC42BPAQ5VT25 1732 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 MYO1GB0I1T2 1018 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 SUPT3HB4E1H0 165 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 CDC40O60508 579 aaKnown RBP eCLIP10.87□□□□□ -0.678e-9■□□□□ 8.7
SPTBN1-201ENST00000333896 ZNF18P17022 549 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 COPB2P35606 906 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 CAPZA2P47755 286 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 MFAP3P55082 362 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 PUDPQ08623 228 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 E4F1Q66K89 784 aaPredicted RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 DDIASQ8IXT1 998 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 XAGE3Q8WTP9 111 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 FSD1LQ9BXM9 530 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 DAPK2Q9UIK4 370 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 LINC00854A0A1B0GVQ3 168 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 PDZK1P1A8MUH7 402 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 GNB5O14775 395 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 POLGP54098 1239 aaPredicted RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 TTC30AQ86WT1 665 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 SIX5Q8N196 739 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 MYL10Q9BUA6 226 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 KCND1Q9NSA2 647 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 CHD2O14647 1828 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 ABCB1P08183 1280 aaPredicted RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 SERPINH1P50454 418 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 MDH1BQ5I0G3 518 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 CYB5RLQ6IPT4 315 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 THEMISQ8N1K5 641 aaPredicted RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 SYMPKQ92797 1274 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 RBM41Q96IZ5 413 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 DHX36Q9H2U1 1008 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 CDY2AQ9Y6F7 541 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 CDY1Q9Y6F8 540 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 TESPA1A2RU30 521 aaPredicted RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 FAM69CQ0P6D2 419 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 SPANXN2Q5MJ10 180 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 MMGT1Q8N4V1 131 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 ULK4Q96C45 1275 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 THTPAQ9BU02 230 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 ERFP50548 548 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 NUP93Q8N1F7 819 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 LINC00301Q8NCQ3 95 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 SARS2Q9NP81 518 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 STAP2Q9UGK3 403 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 SLC8A2Q9UPR5 921 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 WDR64B1ANS9 1081 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 E5RI56 91 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 RNF103O00237 685 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 HOXB7P09629 217 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 ATP6V1C1P21283 382 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 CCZ1BP86790 482 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 CCZ1P86791 482 aaPredicted RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 PTPN12Q05209 780 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 FUKQ8N0W3 1084 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 ARMT1Q9H993 441 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 DTNAQ9Y4J8 743 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 NCOA3Q9Y6Q9 1424 aa10.87□□□□□ -0.67
SPTBN1-201ENST00000333896 GOLGA8JA6NMD2 632 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms