RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 CXCL8P10145 99 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 GCLMP48507 274 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 VAMP7P51809 220 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 GOLGA8FQ08AF8 430 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 GOLGA8DPQ0D2H9 430 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 UBXN11Q5T124 520 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 MRFAP1L1Q96HT8 127 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 APOL6Q9BWW8 343 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 TMX1Q9H3N1 280 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 CPSF3Q9UKF6 684 aaKnown RBP16.62■□□□□ 0.25
PRPF3-201ENST00000324862 ZNF233A6NK53 670 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 MEIS3P2A8K0S8 358 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 CYP2C18P33260 490 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 ENOX2Q16206 610 aaKnown RBP16.61■□□□□ 0.25
PRPF3-201ENST00000324862 FAM26DQ5JW98 314 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 NOTUMQ6P988 496 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 LRRC8DQ7L1W4 858 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 TMC6Q7Z403 805 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 ANKLE1Q8NAG6 615 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 PARD3BQ8TEW8 1205 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 MFSD14AQ96MC6 490 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 NBNO60934 754 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 STAG3L1P0CL83 205 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 AKAP5P24588 427 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 COL13A1Q5TAT6 717 aaPredicted RBP16.61■□□□□ 0.25
PRPF3-201ENST00000324862 TWF2Q6IBS0 349 aaKnown RBP16.61■□□□□ 0.25
PRPF3-201ENST00000324862 INTS8Q75QN2 995 aaKnown RBP16.61■□□□□ 0.25
PRPF3-201ENST00000324862 DRC7Q8IY82 874 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 WNT8AQ9H1J5 351 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 METTL14Q9HCE5 456 aaKnown RBP16.61■□□□□ 0.25
PRPF3-201ENST00000324862 SNTG2Q9NY99 539 aa16.61■□□□□ 0.25
PRPF3-201ENST00000324862 KRT13P13646 458 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 ITGB8P26012 769 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 PAK2Q13177 524 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 FILIP1LQ4L180 1135 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 SLC27A1Q6PCB7 646 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 NECAB2Q7Z6G3 386 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 ZNF516Q92618 1163 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 ANP32BQ92688 251 aaKnown RBP16.6■□□□□ 0.25
PRPF3-201ENST00000324862 PDLIM2Q96JY6 352 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 HIPK3Q9H422 1215 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 ERVK-5Q9HDB9 667 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 DCDC2CA8MYV0 355 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 SELPP16109 830 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 PBX1P40424 430 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 NCBP1Q09161 790 aaKnown RBP16.6■□□□□ 0.25
PRPF3-201ENST00000324862 KCNMA1Q12791 1236 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 ARID5BQ14865 1188 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 SYCP1Q15431 976 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 TCTN1Q2MV58 587 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 VSTM4Q8IW00 320 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 CAGE1Q8TC20 777 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 ADPGKQ9BRR6 497 aa16.6■□□□□ 0.25
PRPF3-201ENST00000324862 RANBP2P49792 3224 aaKnown RBP16.6■□□□□ 0.25
PRPF3-201ENST00000324862 MROH7Q68CQ1 1323 aa16.59■□□□□ 0.25
PRPF3-201ENST00000324862 EPHB6O15197 1021 aa16.59■□□□□ 0.25
PRPF3-201ENST00000324862 CBFA2T2O43439 604 aa16.59■□□□□ 0.25
PRPF3-201ENST00000324862 AFPP02771 609 aaKnown RBP16.59■□□□□ 0.25
PRPF3-201ENST00000324862 MCF2P10911 925 aa16.59■□□□□ 0.25
PRPF3-201ENST00000324862 OR5B17Q8NGF7 314 aa16.59■□□□□ 0.25
PRPF3-201ENST00000324862 TRIM6Q9C030 488 aaPredicted RBP16.59■□□□□ 0.25
PRPF3-201ENST00000324862 KLK14Q9P0G3 267 aa16.59■□□□□ 0.25
PRPF3-201ENST00000324862 RNF225M0QZC1 329 aaPredicted RBP16.59■□□□□ 0.25
PRPF3-201ENST00000324862 LDHAP00338 332 aaKnown RBP16.59■□□□□ 0.25
PRPF3-201ENST00000324862 SLC10A6Q3KNW5 377 aa16.59■□□□□ 0.25
PRPF3-201ENST00000324862 GPIHBP1Q8IV16 184 aa16.59■□□□□ 0.25
PRPF3-201ENST00000324862 SMG8Q8ND04 991 aaKnown RBP16.59■□□□□ 0.25
PRPF3-201ENST00000324862 IFIH1Q9BYX4 1025 aaKnown RBP16.59■□□□□ 0.25
PRPF3-201ENST00000324862 PRDM5Q9NQX1 630 aaPredicted RBP16.59■□□□□ 0.25
PRPF3-201ENST00000324862 GPR182O15218 404 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 TLR3O15455 904 aaKnown RBP16.58■□□□□ 0.25
PRPF3-201ENST00000324862 ACTN1P12814 892 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 TNNI1P19237 187 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 SLC9A1P19634 815 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 FMO5P49326 533 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 C1orf53Q5VUE5 145 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 BRSK2Q8IWQ3 736 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 CPLX3Q8WVH0 158 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 LPPQ93052 612 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 TOX2Q96NM4 488 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 TMEM117Q9H0C3 514 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 TMEM39AQ9NV64 488 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 TBX21Q9UL17 535 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 IPPQ9Y573 584 aa16.58■□□□□ 0.25
PRPF3-201ENST00000324862 LACTBL1A8MY62 500 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 AFF1P51825 1210 aaKnown RBP16.58■□□□□ 0.24
PRPF3-201ENST00000324862 BFSP2Q13515 415 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 PSMD6Q15008 389 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 GLRA4Q5JXX5 417 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 UBE2Q1Q7Z7E8 422 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 RTN4RL1Q86UN2 441 aaPredicted RBP16.58■□□□□ 0.24
PRPF3-201ENST00000324862 EFCAB13Q8IY85 973 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 ZNF710Q8N1W2 664 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 ADAM2Q99965 735 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 KIAA1586Q9HCI6 787 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 FAM207AQ9NSI2 230 aaPredicted RBP16.58■□□□□ 0.24
PRPF3-201ENST00000324862 LAMA3Q16787 3333 aa16.58■□□□□ 0.24
PRPF3-201ENST00000324862 TRIM43BA6NCK2 446 aa16.57■□□□□ 0.24
PRPF3-201ENST00000324862 MAPK13O15264 365 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms