RNA–Protein interactions for RNA: ENST00000322099.11

PCBP4-201, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 1,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-201ENST00000322099 PCDHB18PQ96TA0 734 aa16.96■□□□□ 0.31
PCBP4-201ENST00000322099 DEFB129Q9H1M3 183 aa16.96■□□□□ 0.31
PCBP4-201ENST00000322099 HERC5Q9UII4 1024 aaKnown RBP16.96■□□□□ 0.31
PCBP4-201ENST00000322099 A0A1W2PRG0 241 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 FSCN2O14926 492 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 P4HBP07237 508 aaKnown RBP16.95■□□□□ 0.3
PCBP4-201ENST00000322099 VIMP08670 466 aaKnown RBP16.95■□□□□ 0.3
PCBP4-201ENST00000322099 RARAP10276 462 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 PLS3P13797 630 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 ITIH2P19823 946 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 FGFR4P22455 802 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 NF2P35240 595 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 GCLMP48507 274 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 C1orf220Q5T0J3 134 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 NOP9Q86U38 636 aaKnown RBP16.95■□□□□ 0.3
PCBP4-201ENST00000322099 FAM228AQ86W67 206 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 CCDC63Q8NA47 563 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 BANK1Q8NDB2 785 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 CCHCR1Q8TD31 782 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 NUP85Q9BW27 656 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 HSPBP1Q9NZL4 362 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 COL4A5P29400 1685 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 SNX3O60493 162 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 TCEA3O75764 348 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 SGPL1O95470 568 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 OAS1P00973 400 aaKnown RBP16.95■□□□□ 0.3
PCBP4-201ENST00000322099 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
PCBP4-201ENST00000322099 GTF2BQ00403 316 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 PPARDQ03181 441 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 PPP1R7Q15435 360 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 RNF207Q6ZRF8 634 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 NIPA1Q7RTP0 329 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 ELAC2Q9BQ52 826 aaKnown RBP16.95■□□□□ 0.3
PCBP4-201ENST00000322099 SGIP1Q9BQI5 828 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 MXRA8Q9BRK3 442 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 TMX2Q9Y320 296 aa16.95■□□□□ 0.3
PCBP4-201ENST00000322099 MYH11P35749 1972 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 SMIM23A6NLE4 172 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 LYPLA2O95372 231 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 ARP10275 920 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 FMO1Q01740 532 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 CDR2Q01850 454 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 TNIP1Q15025 636 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 EXOC3L1Q86VI1 746 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 GPATCH11Q8N954 259 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 GRK7Q8WTQ7 553 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 KIFAP3Q92845 792 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 TMEM117Q9H0C3 514 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 VPS33BQ9H267 617 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 ATP6V0A4Q9HBG4 840 aa16.94■□□□□ 0.3
PCBP4-201ENST00000322099 O00370 1275 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 ATP2C2O75185 946 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 RAD17O75943 681 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 ATP6V1G2O95670 118 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 MKRN3Q13064 507 aaKnown RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 KCTD19Q17RG1 926 aaPredicted RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 RHBDF2Q6PJF5 856 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 FAM160B2Q86V87 743 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 PSPC1Q8WXF1 523 aaKnown RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 UPF1Q92900 1129 aaKnown RBP eCLIP16.93■□□□□ 0.35e-6■■■■□ 21.3
PCBP4-201ENST00000322099 ZNF653Q96CK0 615 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 FAM81BQ96LP2 452 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 CBWD1Q9BRT8 395 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 COQ4Q9Y3A0 265 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 USP15Q9Y4E8 981 aaPredicted RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 A0A1B0GUA9 196 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 SUN1O94901 812 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 GPC3P51654 580 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 JAG1P78504 1218 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 ENPEPQ07075 957 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 PDE4CQ08493 712 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 ZNF746Q6NUN9 644 aaPredicted RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 HIBCHQ6NVY1 386 aaPredicted RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 MIER3Q7Z3K6 550 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 SPICE1Q8N0Z3 855 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 SNF8Q96H20 258 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 KREMEN1Q96MU8 473 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 SCLT1Q96NL6 688 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 CDC42EP4Q9H3Q1 356 aaKnown RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 PCIF1Q9H4Z3 704 aa16.93■□□□□ 0.3
PCBP4-201ENST00000322099 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
PCBP4-201ENST00000322099 TCRBV7S2A1N4TA0A589 114 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 ANKRD63C9JTQ0 380 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 CYP11B1P15538 503 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 ELF1P32519 619 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 GTF2H1P32780 548 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 PTK6Q13882 451 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 RRP1BQ14684 758 aaKnown RBP16.92■□□□□ 0.3
PCBP4-201ENST00000322099 SGO2Q562F6 1265 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 KRT39Q6A163 491 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 SLC30A10Q6XR72 485 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 CEP57Q86XR8 500 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 DYDC1Q8WWB3 177 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 ARHGEF2Q92974 986 aaKnown RBP16.92■□□□□ 0.3
PCBP4-201ENST00000322099 GMLQ99445 158 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 EXOC7Q9UPT5 735 aa16.92■□□□□ 0.3
PCBP4-201ENST00000322099 PTPN22Q9Y2R2 807 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms